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PARGP1 (poly(ADP-ribose) glycohydrolase pseudogene 1)

Identity

Alias (NCBI)-
HGNC (Hugo) PARGP1
LocusID (NCBI) 728407
Atlas_Id 71665
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 45854835 and ends at 45972428 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PARGP1   45008
Cards
Entrez_Gene (NCBI)PARGP1    poly(ADP-ribose) glycohydrolase pseudogene 1
Aliases
GeneCards (Weizmann)PARGP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:45854835-45972428 [Contig_View]  PARGP1 [Vega]
TCGA cBioPortalPARGP1
AceView (NCBI)PARGP1
Genatlas (Paris)PARGP1
SOURCE (Princeton)PARGP1
Genetics Home Reference (NIH)PARGP1
Genomic and cartography
GoldenPath hg38 (UCSC)PARGP1  -     chr10:45854835-45972428 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PARGP1  -     10q11.22   [Description]    (hg19-Feb_2009)
GoldenPathPARGP1 - 10q11.22 [CytoView hg19]  PARGP1 - 10q11.22 [CytoView hg38]
genome Data Viewer NCBIPARGP1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF130105 AK293897 AK294819 AK311609 DA800072
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PARGP1
Gene ExpressionPARGP1 [ NCBI-GEO ]   PARGP1 [ EBI - ARRAY_EXPRESS ]   PARGP1 [ SEEK ]   PARGP1 [ MEM ]
Gene Expression Viewer (FireBrowse)PARGP1 [ Firebrowse - Broad ]
GenevisibleExpression of PARGP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728407
GTEX Portal (Tissue expression)PARGP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PARGP1
Blocks (Seattle)PARGP1
Protein Interaction databases
BioGRIDPARGP1
STRING (EMBL)PARGP1
ZODIACPARGP1
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePARGP1
EVEXPARGP1
GoPubMedPARGP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:21:49 CET 2020

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