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PARP15 (poly(ADP-ribose) polymerase family member 15)

Identity

Other aliasARTD7
BAL3
pART7
HGNC (Hugo) PARP15
LocusID (NCBI) 165631
Atlas_Id 56860
Location 3q21.1  [Link to chromosome band 3q21]
Location_base_pair Starts at 122577602 and ends at 122639047 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PARP15 (3q21.1) / MAT2A (2p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PARP15   26876
Cards
Entrez_Gene (NCBI)PARP15  165631  poly(ADP-ribose) polymerase family member 15
AliasesARTD7; BAL3; pART7
GeneCards (Weizmann)PARP15
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:122577602-122639047 [Contig_View]  PARP15 [Vega]
TCGA cBioPortalPARP15
AceView (NCBI)PARP15
Genatlas (Paris)PARP15
WikiGenes165631
SOURCE (Princeton)PARP15
Genetics Home Reference (NIH)PARP15
Genomic and cartography
GoldenPath hg38 (UCSC)PARP15  -     chr3:122577602-122639047 +  3q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PARP15  -     3q21.1   [Description]    (hg19-Feb_2009)
EnsemblPARP15 - 3q21.1 [CytoView hg19]  PARP15 - 3q21.1 [CytoView hg38]
Mapping of homologs : NCBIPARP15 [Mapview hg19]  PARP15 [Mapview hg38]
OMIM612066   
Gene and transcription
Genbank (Entrez)AK097515 AK097916 AK309863 BC101701 BC101703
RefSeq transcript (Entrez)NM_001113523 NM_001308320 NM_001308321 NM_152615
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PARP15
Cluster EST : UnigeneHs.120250 [ NCBI ]
CGAP (NCI)Hs.120250
Gene ExpressionPARP15 [ NCBI-GEO ]   PARP15 [ EBI - ARRAY_EXPRESS ]   PARP15 [ SEEK ]   PARP15 [ MEM ]
Gene Expression Viewer (FireBrowse)PARP15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)165631
GTEX Portal (Tissue expression)PARP15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ460N3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ460N3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ460N3
Splice isoforms : SwissVarQ460N3
PhosPhoSitePlusQ460N3
Domaine pattern : Prosite (Expaxy)MACRO (PS51154)    PARP_CATALYTIC (PS51059)   
Domains : Interpro (EBI)Macro_dom    Poly(ADP-ribose)pol_cat_dom   
Domain families : Pfam (Sanger)Macro (PF01661)    PARP (PF00644)   
Domain families : Pfam (NCBI)pfam01661    pfam00644   
Domain families : Smart (EMBL)A1pp (SM00506)  
Conserved Domain (NCBI)PARP15
DMDM Disease mutations165631
Blocks (Seattle)PARP15
PDB (SRS)3BLJ    3GEY    3V2B    4F0E   
PDB (PDBSum)3BLJ    3GEY    3V2B    4F0E   
PDB (IMB)3BLJ    3GEY    3V2B    4F0E   
PDB (RSDB)3BLJ    3GEY    3V2B    4F0E   
Structural Biology KnowledgeBase3BLJ    3GEY    3V2B    4F0E   
SCOP (Structural Classification of Proteins)3BLJ    3GEY    3V2B    4F0E   
CATH (Classification of proteins structures)3BLJ    3GEY    3V2B    4F0E   
SuperfamilyQ460N3
Peptide AtlasQ460N3
IPIIPI00746210   IPI01012780   IPI00945048   IPI00945605   IPI00922709   
Protein Interaction databases
DIP (DOE-UCLA)Q460N3
IntAct (EBI)Q460N3
BioGRIDPARP15
STRING (EMBL)PARP15
ZODIACPARP15
Ontologies - Pathways
QuickGOQ460N3
Ontology : AmiGONAD+ ADP-ribosyltransferase activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  
Ontology : EGO-EBINAD+ ADP-ribosyltransferase activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  
NDEx NetworkPARP15
Atlas of Cancer Signalling NetworkPARP15
Wikipedia pathwaysPARP15
Orthology - Evolution
OrthoDB165631
Phylogenetic Trees/Animal Genes : TreeFamPARP15
HOVERGENQ460N3
HOGENOMQ460N3
Homologs : HomoloGenePARP15
Homology/Alignments : Family Browser (UCSC)PARP15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPARP15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PARP15
dbVarPARP15
ClinVarPARP15
1000_GenomesPARP15 
Exome Variant ServerPARP15
ExAC (Exome Aggregation Consortium)PARP15 (select the gene name)
Genetic variants : HAPMAP165631
Genomic Variants (DGV)PARP15 [DGVbeta]
DECIPHERPARP15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPARP15 
Mutations
ICGC Data PortalPARP15 
TCGA Data PortalPARP15 
Broad Tumor PortalPARP15
OASIS PortalPARP15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPARP15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPARP15
BioMutasearch PARP15
DgiDB (Drug Gene Interaction Database)PARP15
DoCM (Curated mutations)PARP15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PARP15 (select a term)
intoGenPARP15
Cancer3DPARP15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612066   
Orphanet
MedgenPARP15
Genetic Testing Registry PARP15
NextProtQ460N3 [Medical]
TSGene165631
GENETestsPARP15
Target ValidationPARP15
Huge Navigator PARP15 [HugePedia]
snp3D : Map Gene to Disease165631
BioCentury BCIQPARP15
ClinGenPARP15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD165631
Chemical/Pharm GKB GenePA134905094
Clinical trialPARP15
Miscellaneous
canSAR (ICR)PARP15 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePARP15
EVEXPARP15
GoPubMedPARP15
iHOPPARP15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:48:31 CEST 2017

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