Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PART1 (prostate androgen-regulated transcript 1)

Identity

Alias (NCBI)NCRNA00206
HGNC (Hugo) PART1
HGNC Alias symbDKFZP586D0823
NCRNA00206
HGNC Alias namenon-protein coding RNA 206
HGNC Previous nameprostate androgen-regulated transcript 1 (non-protein coding)
LocusID (NCBI) 25859
Atlas_Id 41640
Location 5q12.1  [Link to chromosome band 5q12]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PART1 (5q12.1) / MALAT1 (11q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PART1   17263
Cards
Entrez_Gene (NCBI)PART1    prostate androgen-regulated transcript 1
AliasesNCRNA00206
GeneCards (Weizmann)PART1
Ensembl hg19 (Hinxton)ENSG00000152931 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152931 [Gene_View]  ENSG00000152931 [Sequence]  - [Contig_View]  PART1 [Vega]
ICGC DataPortalENSG00000152931
TCGA cBioPortalPART1
AceView (NCBI)PART1
Genatlas (Paris)PART1
SOURCE (Princeton)PART1
Genetics Home Reference (NIH)PART1
Genomic and cartography
GoldenPath hg38 (UCSC)PART1  -  
GoldenPath hg19 (UCSC)PART1  -  
GoldenPathPART1 - [CytoView hg19]  PART1 - [CytoView hg38]
ImmunoBaseENSG00000152931
Genome Data Viewer NCBIPART1 [Mapview hg19]  
OMIM604991   
Gene and transcription
Genbank (Entrez)AF070547 AF163475 AK094518 AK095768 AK312071
RefSeq transcript (Entrez)NM_001039499 NM_001040639
Consensus coding sequences : CCDS (NCBI)PART1
Gene ExpressionPART1 [ NCBI-GEO ]   PART1 [ EBI - ARRAY_EXPRESS ]   PART1 [ SEEK ]   PART1 [ MEM ]
Gene Expression Viewer (FireBrowse)PART1 [ Firebrowse - Broad ]
GenevisibleExpression of PART1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25859
GTEX Portal (Tissue expression)PART1
Human Protein AtlasENSG00000152931-PART1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PART1
Human Protein Atlas [tissue]ENSG00000152931-PART1 [tissue]
HPRD09230
Protein Interaction databases
BioGRIDPART1
STRING (EMBL)PART1
ZODIACPART1
Ontologies - Pathways
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPART1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:24:22 CEST 2021

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