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PARTICL (promoter of MAT2A antisense radiation-induced circulating long non-coding RNA)

Identity

Alias_symbol (synonym)PARTICLE
Other alias
HGNC (Hugo) PARTICL
LocusID (NCBI) 100630918
Atlas_Id 77373
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 85537467 and ends at 85538886 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PARTICL   50886
Cards
Entrez_Gene (NCBI)PARTICL  100630918  promoter of MAT2A antisense radiation-induced circulating long non-coding RNA
AliasesPARTICLE
GeneCards (Weizmann)PARTICL
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:85537467-85538886 [Contig_View]  PARTICL [Vega]
TCGA cBioPortalPARTICL
AceView (NCBI)PARTICL
Genatlas (Paris)PARTICL
WikiGenes100630918
SOURCE (Princeton)PARTICL
Genetics Home Reference (NIH)PARTICL
Genomic and cartography
GoldenPath hg38 (UCSC)PARTICL  -     chr2:85537467-85538886 -  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PARTICL  -     2p11.2   [Description]    (hg19-Feb_2009)
EnsemblPARTICL - 2p11.2 [CytoView hg19]  PARTICL - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIPARTICL [Mapview hg19]  PARTICL [Mapview hg38]
OMIM616350   
Gene and transcription
Genbank (Entrez)BC009563
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PARTICL
Cluster EST : UnigeneHs.66049 [ NCBI ]
CGAP (NCI)Hs.66049
Gene ExpressionPARTICL [ NCBI-GEO ]   PARTICL [ EBI - ARRAY_EXPRESS ]   PARTICL [ SEEK ]   PARTICL [ MEM ]
Gene Expression Viewer (FireBrowse)PARTICL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100630918
GTEX Portal (Tissue expression)PARTICL
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PARTICL
DMDM Disease mutations100630918
Blocks (Seattle)PARTICL
Protein Interaction databases
BioGRIDPARTICL
STRING (EMBL)PARTICL
ZODIACPARTICL
Ontologies - Pathways
Huge Navigator PARTICL [HugePedia]
snp3D : Map Gene to Disease100630918
BioCentury BCIQPARTICL
ClinGenPARTICL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100630918
Clinical trialPARTICL
Miscellaneous
canSAR (ICR)PARTICL (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePARTICL
EVEXPARTICL
GoPubMedPARTICL
iHOPPARTICL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:59 CET 2017

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