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PARVG (parvin gamma)

Identity

Other alias-
HGNC (Hugo) PARVG
LocusID (NCBI) 64098
Atlas_Id 45874
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 44568836 and ends at 44604349 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PARVG   14654
Cards
Entrez_Gene (NCBI)PARVG  64098  parvin gamma
Aliases
GeneCards (Weizmann)PARVG
Ensembl hg19 (Hinxton)ENSG00000138964 [Gene_View]  chr22:44568836-44604349 [Contig_View]  PARVG [Vega]
Ensembl hg38 (Hinxton)ENSG00000138964 [Gene_View]  chr22:44568836-44604349 [Contig_View]  PARVG [Vega]
ICGC DataPortalENSG00000138964
TCGA cBioPortalPARVG
AceView (NCBI)PARVG
Genatlas (Paris)PARVG
WikiGenes64098
SOURCE (Princeton)PARVG
Genetics Home Reference (NIH)PARVG
Genomic and cartography
GoldenPath hg19 (UCSC)PARVG  -     chr22:44568836-44604349 +  22q13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PARVG  -     22q13.31   [Description]    (hg38-Dec_2013)
EnsemblPARVG - 22q13.31 [CytoView hg19]  PARVG - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBIPARVG [Mapview hg19]  PARVG [Mapview hg38]
OMIM608122   
Gene and transcription
Genbank (Entrez)AF237772 AI075834 AK225929 AK293360 AK307294
RefSeq transcript (Entrez)NM_001137605 NM_001137606 NM_001254741 NM_001254742 NM_001254743 NM_022141
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)PARVG
Cluster EST : UnigeneHs.666944 [ NCBI ]
CGAP (NCI)Hs.666944
Alternative Splicing GalleryENSG00000138964
Gene ExpressionPARVG [ NCBI-GEO ]   PARVG [ EBI - ARRAY_EXPRESS ]   PARVG [ SEEK ]   PARVG [ MEM ]
Gene Expression Viewer (FireBrowse)PARVG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64098
GTEX Portal (Tissue expression)PARVG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HBI0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HBI0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HBI0
Splice isoforms : SwissVarQ9HBI0
PhosPhoSitePlusQ9HBI0
Domaine pattern : Prosite (Expaxy)CH (PS50021)   
Domains : Interpro (EBI)CH-domain    Parvin   
Domain families : Pfam (Sanger)CH (PF00307)   
Domain families : Pfam (NCBI)pfam00307   
Domain families : Smart (EMBL)CH (SM00033)  
Conserved Domain (NCBI)PARVG
DMDM Disease mutations64098
Blocks (Seattle)PARVG
SuperfamilyQ9HBI0
Human Protein AtlasENSG00000138964
Peptide AtlasQ9HBI0
HPRD16285
IPIIPI00005512   IPI00215934   IPI00552212   IPI00880185   IPI00877707   IPI00878041   
Protein Interaction databases
DIP (DOE-UCLA)Q9HBI0
IntAct (EBI)Q9HBI0
FunCoupENSG00000138964
BioGRIDPARVG
STRING (EMBL)PARVG
ZODIACPARVG
Ontologies - Pathways
QuickGOQ9HBI0
Ontology : AmiGOactin binding  protein binding  cytoplasm  cytoskeleton  plasma membrane  focal adhesion  cell-matrix adhesion  actin cytoskeleton reorganization  
Ontology : EGO-EBIactin binding  protein binding  cytoplasm  cytoskeleton  plasma membrane  focal adhesion  cell-matrix adhesion  actin cytoskeleton reorganization  
Pathways : KEGGFocal adhesion   
NDEx NetworkPARVG
Atlas of Cancer Signalling NetworkPARVG
Wikipedia pathwaysPARVG
Orthology - Evolution
OrthoDB64098
GeneTree (enSembl)ENSG00000138964
Phylogenetic Trees/Animal Genes : TreeFamPARVG
HOVERGENQ9HBI0
HOGENOMQ9HBI0
Homologs : HomoloGenePARVG
Homology/Alignments : Family Browser (UCSC)PARVG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPARVG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PARVG
dbVarPARVG
ClinVarPARVG
1000_GenomesPARVG 
Exome Variant ServerPARVG
ExAC (Exome Aggregation Consortium)PARVG (select the gene name)
Genetic variants : HAPMAP64098
Genomic Variants (DGV)PARVG [DGVbeta]
DECIPHER (Syndromes)22:44568836-44604349  ENSG00000138964
CONAN: Copy Number AnalysisPARVG 
Mutations
ICGC Data PortalPARVG 
TCGA Data PortalPARVG 
Broad Tumor PortalPARVG
OASIS PortalPARVG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPARVG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPARVG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PARVG
DgiDB (Drug Gene Interaction Database)PARVG
DoCM (Curated mutations)PARVG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PARVG (select a term)
intoGenPARVG
Cancer3DPARVG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608122   
Orphanet
MedgenPARVG
Genetic Testing Registry PARVG
NextProtQ9HBI0 [Medical]
TSGene64098
GENETestsPARVG
Huge Navigator PARVG [HugePedia]
snp3D : Map Gene to Disease64098
BioCentury BCIQPARVG
ClinGenPARVG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64098
Chemical/Pharm GKB GenePA32952
Clinical trialPARVG
Miscellaneous
canSAR (ICR)PARVG (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePARVG
EVEXPARVG
GoPubMedPARVG
iHOPPARVG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:13:35 CEST 2017

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