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PAUPAR (PAX6 upstream antisense RNA)

Identity

Alias (NCBI)-
HGNC (Hugo) PAUPAR
LocusID (NCBI) 103157000
Atlas_Id 71680
Location 11p13  [Link to chromosome band 11p13]
Location_base_pair Starts at 31826567 and ends at 31829303 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PAUPAR   49670
Cards
Entrez_Gene (NCBI)PAUPAR    PAX6 upstream antisense RNA
Aliases
GeneCards (Weizmann)PAUPAR
Ensembl hg19 (Hinxton)ENSG00000281880 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281880 [Gene_View]  ENSG00000281880 [Sequence]  chr11:31826567-31829303 [Contig_View]  PAUPAR [Vega]
ICGC DataPortalENSG00000281880
TCGA cBioPortalPAUPAR
AceView (NCBI)PAUPAR
Genatlas (Paris)PAUPAR
SOURCE (Princeton)PAUPAR
Genetics Home Reference (NIH)PAUPAR
Genomic and cartography
GoldenPath hg38 (UCSC)PAUPAR  -     chr11:31826567-31829303 +  11p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAUPAR  -     11p13   [Description]    (hg19-Feb_2009)
GoldenPathPAUPAR - 11p13 [CytoView hg19]  PAUPAR - 11p13 [CytoView hg38]
ImmunoBaseENSG00000281880
Genome Data Viewer NCBIPAUPAR [Mapview hg19]  
Gene and transcription
Genbank (Entrez)KJ434992
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)PAUPAR
Gene ExpressionPAUPAR [ NCBI-GEO ]   PAUPAR [ EBI - ARRAY_EXPRESS ]   PAUPAR [ SEEK ]   PAUPAR [ MEM ]
Gene Expression Viewer (FireBrowse)PAUPAR [ Firebrowse - Broad ]
GenevisibleExpression of PAUPAR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103157000
GTEX Portal (Tissue expression)PAUPAR
Human Protein AtlasENSG00000281880-PAUPAR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PAUPAR
Human Protein Atlas [tissue]ENSG00000281880-PAUPAR [tissue]
Protein Interaction databases
BioGRIDPAUPAR
STRING (EMBL)PAUPAR
ZODIACPAUPAR
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPAUPAR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:15:28 CEST 2021

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