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PAX8-AS1 (PAX8 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PAX8-AS1
LocusID (NCBI) 654433
Atlas_Id 56765
Location 2q14.1  [Link to chromosome band 2q14]
Location_base_pair Starts at 113236269 and ends at 113267023 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PAX8-AS1   49271
Cards
Entrez_Gene (NCBI)PAX8-AS1  654433  PAX8 antisense RNA 1
Aliases
GeneCards (Weizmann)PAX8-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:113236269-113267023 [Contig_View]  PAX8-AS1 [Vega]
TCGA cBioPortalPAX8-AS1
AceView (NCBI)PAX8-AS1
Genatlas (Paris)PAX8-AS1
WikiGenes654433
SOURCE (Princeton)PAX8-AS1
Genetics Home Reference (NIH)PAX8-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PAX8-AS1  -     chr2:113236269-113267023 +  2q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAX8-AS1  -     2q14.1   [Description]    (hg19-Feb_2009)
EnsemblPAX8-AS1 - 2q14.1 [CytoView hg19]  PAX8-AS1 - 2q14.1 [CytoView hg38]
Mapping of homologs : NCBIPAX8-AS1 [Mapview hg19]  PAX8-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001856 AK056052 AK056355 AK126431 AK130275
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PAX8-AS1
Cluster EST : UnigeneHs.656660 [ NCBI ]
CGAP (NCI)Hs.656660
Gene ExpressionPAX8-AS1 [ NCBI-GEO ]   PAX8-AS1 [ EBI - ARRAY_EXPRESS ]   PAX8-AS1 [ SEEK ]   PAX8-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PAX8-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)654433
GTEX Portal (Tissue expression)PAX8-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PAX8-AS1
DMDM Disease mutations654433
Blocks (Seattle)PAX8-AS1
IPIIPI00385006   
Protein Interaction databases
BioGRIDPAX8-AS1
STRING (EMBL)PAX8-AS1
ZODIACPAX8-AS1
Ontologies - Pathways
Huge Navigator PAX8-AS1 [HugePedia]
snp3D : Map Gene to Disease654433
BioCentury BCIQPAX8-AS1
ClinGenPAX8-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD654433
Clinical trialPAX8-AS1
Miscellaneous
canSAR (ICR)PAX8-AS1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAX8-AS1
EVEXPAX8-AS1
GoPubMedPAX8-AS1
iHOPPAX8-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:48:35 CEST 2017

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