Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PAXIP1-AS2 (PAXIP1 antisense RNA 2)

Identity

Alias_namesPAXIP1OS
PAXIP1 opposite strand
Other alias
HGNC (Hugo) PAXIP1-AS2
LocusID (NCBI) 100132707
Atlas_Id 71685
Location 7q36.2  [Link to chromosome band 7q36]
Location_base_pair Starts at 154928517 and ends at 154949486 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PAXIP1-AS2   48958
Cards
Entrez_Gene (NCBI)PAXIP1-AS2  100132707  PAXIP1 antisense RNA 2
AliasesPAXIP1OS
GeneCards (Weizmann)PAXIP1-AS2
Ensembl hg19 (Hinxton)ENSG00000214106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214106 [Gene_View]  chr7:154928517-154949486 [Contig_View]  PAXIP1-AS2 [Vega]
ICGC DataPortalENSG00000214106
TCGA cBioPortalPAXIP1-AS2
AceView (NCBI)PAXIP1-AS2
Genatlas (Paris)PAXIP1-AS2
WikiGenes100132707
SOURCE (Princeton)PAXIP1-AS2
Genetics Home Reference (NIH)PAXIP1-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)PAXIP1-AS2  -     chr7:154928517-154949486 +  7q36.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAXIP1-AS2  -     7q36.2   [Description]    (hg19-Feb_2009)
EnsemblPAXIP1-AS2 - 7q36.2 [CytoView hg19]  PAXIP1-AS2 - 7q36.2 [CytoView hg38]
Mapping of homologs : NCBIPAXIP1-AS2 [Mapview hg19]  PAXIP1-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056609 AK311721 BC033053 BC050402 CA309060
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PAXIP1-AS2
Cluster EST : UnigeneHs.586358 [ NCBI ]
CGAP (NCI)Hs.586358
Alternative Splicing GalleryENSG00000214106
Gene ExpressionPAXIP1-AS2 [ NCBI-GEO ]   PAXIP1-AS2 [ EBI - ARRAY_EXPRESS ]   PAXIP1-AS2 [ SEEK ]   PAXIP1-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)PAXIP1-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132707
GTEX Portal (Tissue expression)PAXIP1-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PAXIP1-AS2
DMDM Disease mutations100132707
Blocks (Seattle)PAXIP1-AS2
Human Protein AtlasENSG00000214106
IPIIPI00887363   
Protein Interaction databases
FunCoupENSG00000214106
BioGRIDPAXIP1-AS2
STRING (EMBL)PAXIP1-AS2
ZODIACPAXIP1-AS2
Ontologies - Pathways
Huge Navigator PAXIP1-AS2 [HugePedia]
snp3D : Map Gene to Disease100132707
BioCentury BCIQPAXIP1-AS2
ClinGenPAXIP1-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132707
Clinical trialPAXIP1-AS2
Miscellaneous
canSAR (ICR)PAXIP1-AS2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAXIP1-AS2
EVEXPAXIP1-AS2
GoPubMedPAXIP1-AS2
iHOPPAXIP1-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:35:35 CEST 2017

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