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PBLD (phenazine biosynthesis like protein domain containing)

Identity

Alias (NCBI)HEL-S-306
MAWBP
MAWDBP
HGNC (Hugo) PBLD
HGNC Alias symbMAWBP
MAWDBP
FLJ14767
HGNC Previous namephenazine biosynthesis-like protein domain containing
LocusID (NCBI) 64081
Atlas_Id 53749
Location 10q21.3  [Link to chromosome band 10q21]
Location_base_pair Starts at 68282660 and ends at 68332928 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PBLD (10q21.3) / PBLD (10q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PBLD   23301
Cards
Entrez_Gene (NCBI)PBLD    phenazine biosynthesis like protein domain containing
AliasesHEL-S-306; MAWBP; MAWDBP
GeneCards (Weizmann)PBLD
Ensembl hg19 (Hinxton)ENSG00000108187 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000108187 [Gene_View]  ENSG00000108187 [Sequence]  chr10:68282660-68332928 [Contig_View]  PBLD [Vega]
ICGC DataPortalENSG00000108187
TCGA cBioPortalPBLD
AceView (NCBI)PBLD
Genatlas (Paris)PBLD
SOURCE (Princeton)PBLD
Genetics Home Reference (NIH)PBLD
Genomic and cartography
GoldenPath hg38 (UCSC)PBLD  -     chr10:68282660-68332928 -  10q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PBLD  -     10q21.3   [Description]    (hg19-Feb_2009)
GoldenPathPBLD - 10q21.3 [CytoView hg19]  PBLD - 10q21.3 [CytoView hg38]
ImmunoBaseENSG00000108187
Genome Data Viewer NCBIPBLD [Mapview hg19]  
OMIM612189   
Gene and transcription
Genbank (Entrez)AB049758 AI114748 AI439144 AK027673 AK092826
RefSeq transcript (Entrez)NM_001033083 NM_022129
Consensus coding sequences : CCDS (NCBI)PBLD
Gene ExpressionPBLD [ NCBI-GEO ]   PBLD [ EBI - ARRAY_EXPRESS ]   PBLD [ SEEK ]   PBLD [ MEM ]
Gene Expression Viewer (FireBrowse)PBLD [ Firebrowse - Broad ]
GenevisibleExpression of PBLD in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64081
GTEX Portal (Tissue expression)PBLD
Human Protein AtlasENSG00000108187-PBLD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP30039   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP30039  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP30039
Catalytic activity : Enzyme5.1.-.- [ Enzyme-Expasy ]   5.1.-.-5.1.-.- [ IntEnz-EBI ]   5.1.-.- [ BRENDA ]   5.1.-.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusP30039
Domains : Interpro (EBI)Phenazine_PhzF   
Domain families : Pfam (Sanger)PhzC-PhzF (PF02567)   
Domain families : Pfam (NCBI)pfam02567   
Conserved Domain (NCBI)PBLD
SuperfamilyP30039
AlphaFold pdb e-kbP30039   
Human Protein Atlas [tissue]ENSG00000108187-PBLD [tissue]
HPRD14366
Protein Interaction databases
DIP (DOE-UCLA)P30039
IntAct (EBI)P30039
BioGRIDPBLD
STRING (EMBL)PBLD
ZODIACPBLD
Ontologies - Pathways
QuickGOP30039
Ontology : AmiGOmolecular_function  protein binding  cytoplasm  cytoplasm  biosynthetic process  isomerase activity  maintenance of gastrointestinal epithelium  negative regulation of transforming growth factor beta receptor signaling pathway  identical protein binding  negative regulation of SMAD protein signal transduction  extracellular exosome  
Ontology : EGO-EBImolecular_function  protein binding  cytoplasm  cytoplasm  biosynthetic process  isomerase activity  maintenance of gastrointestinal epithelium  negative regulation of transforming growth factor beta receptor signaling pathway  identical protein binding  negative regulation of SMAD protein signal transduction  extracellular exosome  
NDEx NetworkPBLD
Atlas of Cancer Signalling NetworkPBLD
Wikipedia pathwaysPBLD
Orthology - Evolution
OrthoDB64081
GeneTree (enSembl)ENSG00000108187
Phylogenetic Trees/Animal Genes : TreeFamPBLD
Homologs : HomoloGenePBLD
Homology/Alignments : Family Browser (UCSC)PBLD
Gene fusions - Rearrangements
Fusion : QuiverPBLD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPBLD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PBLD
dbVarPBLD
ClinVarPBLD
MonarchPBLD
1000_GenomesPBLD 
Exome Variant ServerPBLD
GNOMAD BrowserENSG00000108187
Varsome BrowserPBLD
ACMGPBLD variants
VarityP30039
Genomic Variants (DGV)PBLD [DGVbeta]
DECIPHERPBLD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPBLD 
Mutations
ICGC Data PortalPBLD 
TCGA Data PortalPBLD 
Broad Tumor PortalPBLD
OASIS PortalPBLD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPBLD  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPBLD
Mutations and Diseases : HGMDPBLD
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPBLD
DgiDB (Drug Gene Interaction Database)PBLD
DoCM (Curated mutations)PBLD
CIViC (Clinical Interpretations of Variants in Cancer)PBLD
Cancer3DPBLD
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612189   
Orphanet
DisGeNETPBLD
MedgenPBLD
Genetic Testing Registry PBLD
NextProtP30039 [Medical]
GENETestsPBLD
Target ValidationPBLD
Huge Navigator PBLD [HugePedia]
ClinGenPBLD
Clinical trials, drugs, therapy
MyCancerGenomePBLD
Protein Interactions : CTDPBLD
Pharm GKB GenePA162398821
PharosP30039
Clinical trialPBLD
Miscellaneous
canSAR (ICR)PBLD
HarmonizomePBLD
DataMed IndexPBLD
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPBLD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:24:25 CEST 2021

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