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PCAT19 (prostate cancer associated transcript 19 (non-protein coding))

Identity

Alias_namesLOC100505495
Alias_symbol (synonym)LINC01190
Other alias
HGNC (Hugo) PCAT19
LocusID (NCBI) 100505495
Atlas_Id 53686
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 41454170 and ends at 41500649 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PCAT19   49593
Cards
Entrez_Gene (NCBI)PCAT19  100505495  prostate cancer associated transcript 19 (non-protein coding)
AliasesLINC01190
GeneCards (Weizmann)PCAT19
Ensembl hg19 (Hinxton)ENSG00000267107 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267107 [Gene_View]  chr19:41454170-41500649 [Contig_View]  PCAT19 [Vega]
ICGC DataPortalENSG00000267107
TCGA cBioPortalPCAT19
AceView (NCBI)PCAT19
Genatlas (Paris)PCAT19
WikiGenes100505495
SOURCE (Princeton)PCAT19
Genetics Home Reference (NIH)PCAT19
Genomic and cartography
GoldenPath hg38 (UCSC)PCAT19  -     chr19:41454170-41500649 -  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCAT19  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblPCAT19 - 19q13.2 [CytoView hg19]  PCAT19 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIPCAT19 [Mapview hg19]  PCAT19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK309432 BC070102
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187620
Consensus coding sequences : CCDS (NCBI)PCAT19
Cluster EST : UnigeneHs.648878 [ NCBI ]
CGAP (NCI)Hs.648878
Alternative Splicing GalleryENSG00000267107
Gene ExpressionPCAT19 [ NCBI-GEO ]   PCAT19 [ EBI - ARRAY_EXPRESS ]   PCAT19 [ SEEK ]   PCAT19 [ MEM ]
Gene Expression Viewer (FireBrowse)PCAT19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505495
GTEX Portal (Tissue expression)PCAT19
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCAT19
DMDM Disease mutations100505495
Blocks (Seattle)PCAT19
Human Protein AtlasENSG00000267107
Protein Interaction databases
FunCoupENSG00000267107
BioGRIDPCAT19
STRING (EMBL)PCAT19
ZODIACPCAT19
Ontologies - Pathways
Huge Navigator PCAT19 [HugePedia]
snp3D : Map Gene to Disease100505495
BioCentury BCIQPCAT19
ClinGenPCAT19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505495
Clinical trialPCAT19
Miscellaneous
canSAR (ICR)PCAT19 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCAT19
EVEXPCAT19
GoPubMedPCAT19
iHOPPCAT19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:48:39 CEST 2017

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