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PCAT29 (prostate cancer associated transcript 29 (non-protein coding))

Identity

Other alias-
HGNC (Hugo) PCAT29
LocusID (NCBI) 104472713
Atlas_Id 54957
Location 15q23  [Link to chromosome band 15q23]
Location_base_pair Starts at 69592200 and ends at 69695750 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PCAT29   50895
Cards
Entrez_Gene (NCBI)PCAT29  104472713  prostate cancer associated transcript 29 (non-protein coding)
Aliases
GeneCards (Weizmann)PCAT29
Ensembl hg19 (Hinxton)ENSG00000259641 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259641 [Gene_View]  chr15:69592200-69695750 [Contig_View]  PCAT29 [Vega]
ICGC DataPortalENSG00000259641
TCGA cBioPortalPCAT29
AceView (NCBI)PCAT29
Genatlas (Paris)PCAT29
WikiGenes104472713
SOURCE (Princeton)PCAT29
Genetics Home Reference (NIH)PCAT29
Genomic and cartography
GoldenPath hg38 (UCSC)PCAT29  -     chr15:69592200-69695750 +  15q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCAT29  -     15q23   [Description]    (hg19-Feb_2009)
EnsemblPCAT29 - 15q23 [CytoView hg19]  PCAT29 - 15q23 [CytoView hg38]
Mapping of homologs : NCBIPCAT29 [Mapview hg19]  PCAT29 [Mapview hg38]
OMIM616273   
Gene and transcription
Genbank (Entrez)AA635443 AK097902 CA312547
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PCAT29
Cluster EST : UnigeneHs.430824 [ NCBI ]
CGAP (NCI)Hs.430824
Alternative Splicing GalleryENSG00000259641
Gene ExpressionPCAT29 [ NCBI-GEO ]   PCAT29 [ EBI - ARRAY_EXPRESS ]   PCAT29 [ SEEK ]   PCAT29 [ MEM ]
Gene Expression Viewer (FireBrowse)PCAT29 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104472713
GTEX Portal (Tissue expression)PCAT29
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCAT29
DMDM Disease mutations104472713
Blocks (Seattle)PCAT29
Human Protein AtlasENSG00000259641
Protein Interaction databases
FunCoupENSG00000259641
BioGRIDPCAT29
STRING (EMBL)PCAT29
ZODIACPCAT29
Ontologies - Pathways
Huge Navigator PCAT29 [HugePedia]
snp3D : Map Gene to Disease104472713
BioCentury BCIQPCAT29
ClinGenPCAT29
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104472713
Clinical trialPCAT29
Miscellaneous
canSAR (ICR)PCAT29 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCAT29
EVEXPCAT29
GoPubMedPCAT29
iHOPPCAT29
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:48:39 CEST 2017

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