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PCAT7 (prostate cancer associated transcript 7 (non-protein coding))

Identity

Alias_symbol (synonym)PCAN-R2
Other alias
HGNC (Hugo) PCAT7
LocusID (NCBI) 101928099
Atlas_Id 54842
Location 9q22.32  [Link to chromosome band 9q22]
Location_base_pair Starts at 94555045 and ends at 94568756 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PCAT7   48824
Cards
Entrez_Gene (NCBI)PCAT7  101928099  prostate cancer associated transcript 7 (non-protein coding)
AliasesPCAN-R2
GeneCards (Weizmann)PCAT7
Ensembl hg19 (Hinxton)ENSG00000231806 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231806 [Gene_View]  chr9:94555045-94568756 [Contig_View]  PCAT7 [Vega]
ICGC DataPortalENSG00000231806
TCGA cBioPortalPCAT7
AceView (NCBI)PCAT7
Genatlas (Paris)PCAT7
WikiGenes101928099
SOURCE (Princeton)PCAT7
Genetics Home Reference (NIH)PCAT7
Genomic and cartography
GoldenPath hg38 (UCSC)PCAT7  -     chr9:94555045-94568756 +  9q22.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCAT7  -     9q22.32   [Description]    (hg19-Feb_2009)
EnsemblPCAT7 - 9q22.32 [CytoView hg19]  PCAT7 - 9q22.32 [CytoView hg38]
Mapping of homologs : NCBIPCAT7 [Mapview hg19]  PCAT7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123066 BC042913 BI196098 CF146916 HY050400
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PCAT7
Cluster EST : UnigeneHs.674409 [ NCBI ]
CGAP (NCI)Hs.674409
Alternative Splicing GalleryENSG00000231806
Gene ExpressionPCAT7 [ NCBI-GEO ]   PCAT7 [ EBI - ARRAY_EXPRESS ]   PCAT7 [ SEEK ]   PCAT7 [ MEM ]
Gene Expression Viewer (FireBrowse)PCAT7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928099
GTEX Portal (Tissue expression)PCAT7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCAT7
DMDM Disease mutations101928099
Blocks (Seattle)PCAT7
Human Protein AtlasENSG00000231806
Protein Interaction databases
FunCoupENSG00000231806
BioGRIDPCAT7
STRING (EMBL)PCAT7
ZODIACPCAT7
Ontologies - Pathways
Huge Navigator PCAT7 [HugePedia]
snp3D : Map Gene to Disease101928099
BioCentury BCIQPCAT7
ClinGenPCAT7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928099
Clinical trialPCAT7
Miscellaneous
canSAR (ICR)PCAT7 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCAT7
EVEXPCAT7
GoPubMedPCAT7
iHOPPCAT7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:48:40 CEST 2017

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