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PCBP2 (poly(rC) binding protein 2)

Identity

Alias (NCBI)HNRNPE2
HNRPE2
hnRNP-E2
HGNC (Hugo) PCBP2
HGNC Alias symbHNRPE2
hnRNP-E2
HNRNPE2
HGNC Alias nameheterogenous nuclear ribonucleoprotein E2
HGNC Previous namepoly(rC)-binding protein 2
LocusID (NCBI) 5094
Atlas_Id 46265
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 53452102 and ends at 53481162 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
COMT (22q11.21) / PCBP2 (12q13.13)MYCBP2 (13q22.3) / PCBP2 (12q13.13)PCBP2 (12q13.13) / CDK11B (1p36.33)
PCBP2 (12q13.13) / MFN1 (3q26.33)PCBP2 (12q13.13) / PCBP2 (12q13.13)PCBP2 (12q13.13) / UBR4 (1p36.13)
PCBP2 (12q13.13) / UHRF1BP1L (12q23.1)PCBP2 (12q13.13) / YWHAE (17p13.3)THOC6 (16p13.3) / PCBP2 (12q13.13)
TMUB1 (7q36.1) / PCBP2 (12q13.13)USP15 (12q14.1) / PCBP2 (12q13.13)UXS1 (2q12.2) / PCBP2 (12q13.13)
PCBP2 12q13.13 / MFN1 3q26.33PCBP2 12q13.13 / YWHAE 17p13.3USP15 12q14.1 / PCBP2 12q13.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(9;12)(q34;q13) PCBP2/PRRC2B


External links

Nomenclature
HGNC (Hugo)PCBP2   8648
Cards
Entrez_Gene (NCBI)PCBP2    poly(rC) binding protein 2
AliasesHNRNPE2; HNRPE2; hnRNP-E2
GeneCards (Weizmann)PCBP2
Ensembl hg19 (Hinxton)ENSG00000197111 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197111 [Gene_View]  ENSG00000197111 [Sequence]  chr12:53452102-53481162 [Contig_View]  PCBP2 [Vega]
ICGC DataPortalENSG00000197111
TCGA cBioPortalPCBP2
AceView (NCBI)PCBP2
Genatlas (Paris)PCBP2
SOURCE (Princeton)PCBP2
Genetics Home Reference (NIH)PCBP2
Genomic and cartography
GoldenPath hg38 (UCSC)PCBP2  -     chr12:53452102-53481162 +  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCBP2  -     12q13.13   [Description]    (hg19-Feb_2009)
GoldenPathPCBP2 - 12q13.13 [CytoView hg19]  PCBP2 - 12q13.13 [CytoView hg38]
ImmunoBaseENSG00000197111
Genome Data Viewer NCBIPCBP2 [Mapview hg19]  
OMIM601210   
Gene and transcription
Genbank (Entrez)AB188306 AB208825 AK023529 AK123458 AK130583
RefSeq transcript (Entrez)NM_001098620 NM_001128911 NM_001128912 NM_001128913 NM_001128914 NM_005016 NM_031989
Consensus coding sequences : CCDS (NCBI)PCBP2
Gene ExpressionPCBP2 [ NCBI-GEO ]   PCBP2 [ EBI - ARRAY_EXPRESS ]   PCBP2 [ SEEK ]   PCBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)PCBP2 [ Firebrowse - Broad ]
GenevisibleExpression of PCBP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5094
GTEX Portal (Tissue expression)PCBP2
Human Protein AtlasENSG00000197111-PCBP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCBP2
Human Protein Atlas [tissue]ENSG00000197111-PCBP2 [tissue]
HPRD03129
Protein Interaction databases
BioGRIDPCBP2
STRING (EMBL)PCBP2
ZODIACPCBP2
Ontologies - Pathways
Litterature
PubMed213 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPCBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:24:29 CEST 2021

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