Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PCBP3-OT1 (PCBP3 overlapping transcript 1)

Identity

Alias_namesPCBP3OT
poly(rC) binding protein 3 overlapping transcript
PCBP3 overlapping transcript (non-protein coding)
Alias_symbol (synonym)FLJ44028
Other alias
HGNC (Hugo) PCBP3-OT1
LocusID (NCBI) 100113383
Atlas_Id 71692
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 47334210 and ends at 47339397 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PCBP3-OT1   33548
Cards
Entrez_Gene (NCBI)PCBP3-OT1  100113383  PCBP3 overlapping transcript 1
AliasesPCBP3OT
GeneCards (Weizmann)PCBP3-OT1
Ensembl hg19 (Hinxton) [Gene_View]  chr21:47334210-47339397 [Contig_View]  PCBP3-OT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:47334210-47339397 [Contig_View]  PCBP3-OT1 [Vega]
TCGA cBioPortalPCBP3-OT1
AceView (NCBI)PCBP3-OT1
Genatlas (Paris)PCBP3-OT1
WikiGenes100113383
SOURCE (Princeton)PCBP3-OT1
Genetics Home Reference (NIH)PCBP3-OT1
Genomic and cartography
GoldenPath hg19 (UCSC)PCBP3-OT1  -     chr21:47334210-47339397 +  21q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PCBP3-OT1  -     21q22.3   [Description]    (hg38-Dec_2013)
EnsemblPCBP3-OT1 - 21q22.3 [CytoView hg19]  PCBP3-OT1 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIPCBP3-OT1 [Mapview hg19]  PCBP3-OT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126016
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PCBP3-OT1
Cluster EST : UnigeneHs.474049 [ NCBI ]
CGAP (NCI)Hs.474049
Gene ExpressionPCBP3-OT1 [ NCBI-GEO ]   PCBP3-OT1 [ EBI - ARRAY_EXPRESS ]   PCBP3-OT1 [ SEEK ]   PCBP3-OT1 [ MEM ]
Gene Expression Viewer (FireBrowse)PCBP3-OT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100113383
GTEX Portal (Tissue expression)PCBP3-OT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCBP3-OT1
DMDM Disease mutations100113383
Blocks (Seattle)PCBP3-OT1
Protein Interaction databases
BioGRIDPCBP3-OT1
STRING (EMBL)PCBP3-OT1
ZODIACPCBP3-OT1
Ontologies - Pathways
Huge Navigator PCBP3-OT1 [HugePedia]
snp3D : Map Gene to Disease100113383
BioCentury BCIQPCBP3-OT1
ClinGenPCBP3-OT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100113383
Clinical trialPCBP3-OT1
Miscellaneous
canSAR (ICR)PCBP3-OT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCBP3-OT1
EVEXPCBP3-OT1
GoPubMedPCBP3-OT1
iHOPPCBP3-OT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:53 CET 2017

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