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PCDH9-AS2 (PCDH9 antisense RNA 2)

Identity

Alias_namesPCDH9 antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) PCDH9-AS2
LocusID (NCBI) 100874064
Atlas_Id 71701
Location 13q21.32  [Link to chromosome band 13q21]
Location_base_pair Starts at 66825169 and ends at 66915031 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PCDH9-AS2   39896
Cards
Entrez_Gene (NCBI)PCDH9-AS2  100874064  PCDH9 antisense RNA 2
Aliases
GeneCards (Weizmann)PCDH9-AS2
Ensembl hg19 (Hinxton)ENSG00000228842 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228842 [Gene_View]  chr13:66825169-66915031 [Contig_View]  PCDH9-AS2 [Vega]
ICGC DataPortalENSG00000228842
TCGA cBioPortalPCDH9-AS2
AceView (NCBI)PCDH9-AS2
Genatlas (Paris)PCDH9-AS2
WikiGenes100874064
SOURCE (Princeton)PCDH9-AS2
Genetics Home Reference (NIH)PCDH9-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)PCDH9-AS2  -     chr13:66825169-66915031 +  13q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCDH9-AS2  -     13q21.32   [Description]    (hg19-Feb_2009)
EnsemblPCDH9-AS2 - 13q21.32 [CytoView hg19]  PCDH9-AS2 - 13q21.32 [CytoView hg38]
Mapping of homologs : NCBIPCDH9-AS2 [Mapview hg19]  PCDH9-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA889658 BX117607
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PCDH9-AS2
Cluster EST : UnigeneHs.569284 [ NCBI ]
CGAP (NCI)Hs.569284
Alternative Splicing GalleryENSG00000228842
Gene ExpressionPCDH9-AS2 [ NCBI-GEO ]   PCDH9-AS2 [ EBI - ARRAY_EXPRESS ]   PCDH9-AS2 [ SEEK ]   PCDH9-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)PCDH9-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874064
GTEX Portal (Tissue expression)PCDH9-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCDH9-AS2
DMDM Disease mutations100874064
Blocks (Seattle)PCDH9-AS2
Human Protein AtlasENSG00000228842
Protein Interaction databases
FunCoupENSG00000228842
BioGRIDPCDH9-AS2
STRING (EMBL)PCDH9-AS2
ZODIACPCDH9-AS2
Ontologies - Pathways
Huge Navigator PCDH9-AS2 [HugePedia]
snp3D : Map Gene to Disease100874064
BioCentury BCIQPCDH9-AS2
ClinGenPCDH9-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874064
Clinical trialPCDH9-AS2
Miscellaneous
canSAR (ICR)PCDH9-AS2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCDH9-AS2
EVEXPCDH9-AS2
GoPubMedPCDH9-AS2
iHOPPCDH9-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:34:02 CEST 2017

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