PCDHA2 (protocadherin alpha 2)

2014-11-01  

Identity

HGNC
PCDHA2
LOCATION
5q31.3
LOCUSID
56146
ALIAS
PCDH-ALPHA2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 56146
MIM: 606308
HGNC: 8668
Ensembl: ENSG00000204969

Variants:

dbSNP: 56146
ClinVar: 56146
TCGA: ENSG00000204969
COSMIC: PCDHA2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000204969ENST00000378132Q9Y5H9
ENSG00000204969ENST00000520672Q9Y5H9
ENSG00000204969ENST00000526136Q9Y5H9

Expression (GTEx)

0
1
2
3
4
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
126658012003Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.116

Citation

Dessen P

PCDHA2 (protocadherin alpha 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/71709/pcdha2