Atlas of Genetics and Cytogenetics in Oncology and Haematology

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PCF11-AS1 (PCF11 antisense RNA 1)


Alias (NCBI)-
HGNC (Hugo) PCF11-AS1
HGNC Alias symbENST00000602322.1
LocusID (NCBI) 106736475
Atlas_Id 77945
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 83185521 and ends at 83187484 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)PCF11-AS1   52263
Entrez_Gene (NCBI)PCF11-AS1    PCF11 antisense RNA 1
GeneCards (Weizmann)PCF11-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:83185521-83187484 [Contig_View]  PCF11-AS1 [Vega]
TCGA cBioPortalPCF11-AS1
AceView (NCBI)PCF11-AS1
Genatlas (Paris)PCF11-AS1
SOURCE (Princeton)PCF11-AS1
Genetics Home Reference (NIH)PCF11-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PCF11-AS1  -     chr11:83185521-83187484 -  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCF11-AS1  -     11q14.1   [Description]    (hg19-Feb_2009)
GoldenPathPCF11-AS1 - 11q14.1 [CytoView hg19]  PCF11-AS1 - 11q14.1 [CytoView hg38]
genome Data Viewer NCBIPCF11-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK092827 BU687987
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PCF11-AS1
Gene ExpressionPCF11-AS1 [ NCBI-GEO ]   PCF11-AS1 [ EBI - ARRAY_EXPRESS ]   PCF11-AS1 [ SEEK ]   PCF11-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PCF11-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of PCF11-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)106736475
GTEX Portal (Tissue expression)PCF11-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCF11-AS1
Blocks (Seattle)PCF11-AS1
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:22:06 CET 2020

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