PCNX1 (pecanex 1)

2017-10-01 Affiliation

Identity

HGNC

PCNX1

LOCATION

14q24.2

LOCUSID

22990

ALIAS

PCNX,PCNXL1,pecanex

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 22990
MIM: 617655
HGNC: 19740
Ensembl: ENSG00000100731

Variants:

dbSNP: 22990
ClinVar: 22990
TCGA: ENSG00000100731
COSMIC: PCNX1

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000100731	ENST00000304743	Q96RV3
ENSG00000100731	ENST00000439984	Q96RV3
ENSG00000100731	ENST00000554691	H0YJ91
ENSG00000100731	ENST00000555780	H0YJ76
ENSG00000100731	ENST00000556849	H0YJZ0

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
19240061	2009	Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.	75
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
28789966	2017	Pecanex functions as a competitive endogenous RNA of S-phase kinase associated protein 2 in lung cancer.	5

Citation

Dessen P

PCNX1 (pecanex 1)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57118/pcnx1