Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PCNX2 (pecanex homolog 2 (Drosophila))

Identity

Alias_namesPCNXL2
pecanex-like 2 (Drosophila)
Alias_symbol (synonym)KIAA0435
FLJ11383
Other alias
HGNC (Hugo) PCNX2
LocusID (NCBI) 80003
Atlas_Id 55597
Location 1q42.2  [Link to chromosome band 1q42]
Location_base_pair Starts at 233119882 and ends at 233431459 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PCNX2 (1q42.2) / CDCA7 (2q31.1)PCNX2 (1q42.2) / COG2 (1q42.2)PCNX2 (1q42.2) / PCNX2 (1q42.2)
PCNX2 (1q42.2) / PTPN14 (1q41)PCNX2 (1q42.2) / TAOK3 (12q24.23)RPS6KB1 (17q23.1) / PCNX2 (1q42.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PCNX2   8736
Cards
Entrez_Gene (NCBI)PCNX2  80003  pecanex homolog 2 (Drosophila)
AliasesPCNXL2
GeneCards (Weizmann)PCNX2
Ensembl hg19 (Hinxton)ENSG00000135749 [Gene_View]  chr1:233119882-233431459 [Contig_View]  PCNX2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000135749 [Gene_View]  chr1:233119882-233431459 [Contig_View]  PCNX2 [Vega]
ICGC DataPortalENSG00000135749
TCGA cBioPortalPCNX2
AceView (NCBI)PCNX2
Genatlas (Paris)PCNX2
WikiGenes80003
SOURCE (Princeton)PCNX2
Genetics Home Reference (NIH)PCNX2
Genomic and cartography
GoldenPath hg19 (UCSC)PCNX2  -     chr1:233119882-233431459 -  1q42.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PCNX2  -     1q42.2   [Description]    (hg38-Dec_2013)
EnsemblPCNX2 - 1q42.2 [CytoView hg19]  PCNX2 - 1q42.2 [CytoView hg38]
Mapping of homologs : NCBIPCNX2 [Mapview hg19]  PCNX2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB007895 AK021445 AK055374 AK074078 AK090784
RefSeq transcript (Entrez)NM_014801 NM_024938
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_167186 NW_004929294
Consensus coding sequences : CCDS (NCBI)PCNX2
Cluster EST : UnigeneHs.370605 [ NCBI ]
CGAP (NCI)Hs.370605
Alternative Splicing GalleryENSG00000135749
Gene ExpressionPCNX2 [ NCBI-GEO ]   PCNX2 [ EBI - ARRAY_EXPRESS ]   PCNX2 [ SEEK ]   PCNX2 [ MEM ]
Gene Expression Viewer (FireBrowse)PCNX2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)80003
GTEX Portal (Tissue expression)PCNX2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCNX2
DMDM Disease mutations80003
Blocks (Seattle)PCNX2
Human Protein AtlasENSG00000135749
HPRD15108
IPIIPI00186853   IPI00015501   IPI00514056   IPI00893561   IPI00981092   IPI00978722   IPI00984755   IPI00981832   IPI00981944   IPI00902808   IPI00982432   IPI00978205   
Protein Interaction databases
FunCoupENSG00000135749
BioGRIDPCNX2
STRING (EMBL)PCNX2
ZODIACPCNX2
Ontologies - Pathways
Huge Navigator PCNX2 [HugePedia]
snp3D : Map Gene to Disease80003
BioCentury BCIQPCNX2
ClinGenPCNX2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80003
Chemical/Pharm GKB GenePA33081
Clinical trialPCNX2
Miscellaneous
canSAR (ICR)PCNX2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCNX2
EVEXPCNX2
GoPubMedPCNX2
iHOPPCNX2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:13:46 CEST 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.