Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PCYT1B-AS1 (PCYT1B antisense RNA 1)

Identity

Alias_namesPCYT1B antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) PCYT1B-AS1
LocusID (NCBI) 100874088
Atlas_Id 71780
Location Xp22.11  [Link to chromosome band Xp22]
Location_base_pair Starts at 24668190 and ends at 24676354 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PCYT1B-AS1   40431
Cards
Entrez_Gene (NCBI)PCYT1B-AS1  100874088  PCYT1B antisense RNA 1
Aliases
GeneCards (Weizmann)PCYT1B-AS1
Ensembl hg19 (Hinxton)ENSG00000236836 [Gene_View]  chrX:24668190-24676354 [Contig_View]  PCYT1B-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000236836 [Gene_View]  chrX:24668190-24676354 [Contig_View]  PCYT1B-AS1 [Vega]
ICGC DataPortalENSG00000236836
TCGA cBioPortalPCYT1B-AS1
AceView (NCBI)PCYT1B-AS1
Genatlas (Paris)PCYT1B-AS1
WikiGenes100874088
SOURCE (Princeton)PCYT1B-AS1
Genetics Home Reference (NIH)PCYT1B-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)PCYT1B-AS1  -     chrX:24668190-24676354 +  Xp22.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PCYT1B-AS1  -     Xp22.11   [Description]    (hg38-Dec_2013)
EnsemblPCYT1B-AS1 - Xp22.11 [CytoView hg19]  PCYT1B-AS1 - Xp22.11 [CytoView hg38]
Mapping of homologs : NCBIPCYT1B-AS1 [Mapview hg19]  PCYT1B-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)HG512467
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_013253 NT_167197 NW_004929438
Consensus coding sequences : CCDS (NCBI)PCYT1B-AS1
Alternative Splicing GalleryENSG00000236836
Gene ExpressionPCYT1B-AS1 [ NCBI-GEO ]   PCYT1B-AS1 [ EBI - ARRAY_EXPRESS ]   PCYT1B-AS1 [ SEEK ]   PCYT1B-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PCYT1B-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874088
GTEX Portal (Tissue expression)PCYT1B-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCYT1B-AS1
DMDM Disease mutations100874088
Blocks (Seattle)PCYT1B-AS1
Human Protein AtlasENSG00000236836
Protein Interaction databases
FunCoupENSG00000236836
BioGRIDPCYT1B-AS1
STRING (EMBL)PCYT1B-AS1
ZODIACPCYT1B-AS1
Ontologies - Pathways
Huge Navigator PCYT1B-AS1 [HugePedia]
snp3D : Map Gene to Disease100874088
BioCentury BCIQPCYT1B-AS1
ClinGenPCYT1B-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874088
Clinical trialPCYT1B-AS1
Miscellaneous
canSAR (ICR)PCYT1B-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCYT1B-AS1
EVEXPCYT1B-AS1
GoPubMedPCYT1B-AS1
iHOPPCYT1B-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:38:12 CET 2017

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