PDCD6IP (programmed cell death 6 interacting protein)

Identity

Other names	AIP1
	Alix
	DRIP4
	HP95
	MGC17003
HGNC	PDCD6IP
Location	3p22.3
Location_base_pair	Starts at 33814561 and ends at 33886198 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PDCD6IP   8766
Entrez_Gene	PDCD6IP  10015  programmed cell death 6 interacting protein
	Cards
GeneCards	PDCD6IP
Ensembl	ENSG00000170248 [Gene_View]  PDCD6IP [Vega]
Genatlas	PDCD6IP
	Genomic and cartography
GoldenPath	PDCD6IP  -  3p22.3   chr3:33814561-33886198 +  3p22.3   [Description]    (hg18-March_2006)
Ensembl	PDCD6IP - 3p22.3 [CytoView]
NCBI	Mapview
OMIM	608074 Disease map [OMIM]
HomoloGene	PDCD6IP
	Gene and transcription
Genbank	AB037796 [ ENTREZ ]
Genbank	AF151793 [ ENTREZ ]
Genbank	AF250394 [ ENTREZ ]
Genbank	AF349951 [ ENTREZ ]
Genbank	AK002122 [ ENTREZ ]
RefSeq	NM_013374 [ SRS ]    NM_013374 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
CCDS	PDCD6IP CCDS - NCBI
AceView	PDCD6IP AceView - NCBI
Unigene	Hs.475896 [ SRS ]    Hs.475896 [ NCBI ]
Fast-db	3691 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q4W4Y1 [ SRS]    Q4W4Y1 [ EXPASY ]     Q4W4Y1 [ INTERPRO ]     Q4W4Y1 [ UNIPROT ] Q4W4Y1 [ VarSplice FASTA ]
Prosite	PS51180 BRO1 [ SRS ]    PS51180 BRO1 [ Expasy ]
Interpro	IPR004328 BRO1 [ SRS ]    IPR004328 BRO1 [ EBI ]
CluSTr	Q4W4Y1
Pfam	PF03097 BRO1 [ SRS ]    PF03097 BRO1 [ Sanger ]    pfam03097 [ NCBI-CDD ]
Blocks	Q4W4Y1
HPRD	06425
	Protein Interaction databases
DIP	Q4W4Y1
IntAct	Q4W4Y1
	Polymorphism : SNP, mutations, diseases
OMIM	608074    [ map ]
GENETests	608074
SNP	PDCD6IP [dbSNP-NCBI]
SNP	NM_013374 [SNP-NCI]
SNP	PDCD6IP [GeneSNPs - Utah]  PDCD6IP] [HGBASE - SRS]
HAPMAP	PDCD6IP [HAPMAP]
COSMIC	PDCD6IP [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PDCD6IP
Genetic Association	PDCD6IP
CDC HuGE	PDCD6IP
	General knowledge
Family Browser	PDCD6IP [UCSC Family Browser]
SOURCE	NM_013374
SMD	Hs.475896
SAGE	Hs.475896
GO	signal transducer activity [Amigo]  signal transducer activity
GO	receptor activity [Amigo]  receptor activity
GO	protein binding [Amigo]  protein binding
GO	cytoplasm [Amigo]  cytoplasm
GO	cytosol [Amigo]  cytosol
GO	apoptosis [Amigo]  apoptosis
GO	protein transport [Amigo]  protein transport
GO	melanosome [Amigo]  melanosome
GO	interspecies interaction between organisms [Amigo]  interspecies interaction between organisms
PubGene	PDCD6IP
TreeFam	PDCD6IP
CTD	10015 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PDCD6IP Related clones (RZPD - Berlin)
	PubMed
PubMed	53 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:02:41 2008