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PDE1A (phosphodiesterase 1A)

Identity

Alias (NCBI)CAM-PDE 1A
CAM-PDE-1A
HCAM-1
HCAM1
HSPDE1A
HGNC (Hugo) PDE1A
HGNC Previous namephosphodiesterase 1A, calmodulin-dependent
LocusID (NCBI) 5136
Atlas_Id 56212
Location 2q32.1  [Link to chromosome band 2q32]
Location_base_pair Starts at 182140041 and ends at 182522526 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GREB1 (2p25.1) / PDE1A (2q32.1)PDE1A (2q32.1) / PPP1R1C (2q31.3)PKP4 (2q24.1) / PDE1A (2q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PDE1A   8774
Cards
Entrez_Gene (NCBI)PDE1A    phosphodiesterase 1A
AliasesCAM-PDE; CAM-PDE-1A; HCAM-1; HCAM1; 
HSPDE1A
GeneCards (Weizmann)PDE1A
Ensembl hg19 (Hinxton)ENSG00000115252 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115252 [Gene_View]  ENSG00000115252 [Sequence]  chr2:182140041-182522526 [Contig_View]  PDE1A [Vega]
ICGC DataPortalENSG00000115252
TCGA cBioPortalPDE1A
AceView (NCBI)PDE1A
Genatlas (Paris)PDE1A
SOURCE (Princeton)PDE1A
Genetics Home Reference (NIH)PDE1A
Genomic and cartography
GoldenPath hg38 (UCSC)PDE1A  -     chr2:182140041-182522526 -  2q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PDE1A  -     2q32.1   [Description]    (hg19-Feb_2009)
GoldenPathPDE1A - 2q32.1 [CytoView hg19]  PDE1A - 2q32.1 [CytoView hg38]
ImmunoBaseENSG00000115252
Genome Data Viewer NCBIPDE1A [Mapview hg19]  
OMIM171890   
Gene and transcription
Genbank (Entrez)AA846454 AB038227 AB038228 AF110235 AF110236
RefSeq transcript (Entrez)NM_001003683 NM_001258312 NM_001258313 NM_001258314 NM_001363871 NM_005019
Consensus coding sequences : CCDS (NCBI)PDE1A
Gene ExpressionPDE1A [ NCBI-GEO ]   PDE1A [ EBI - ARRAY_EXPRESS ]   PDE1A [ SEEK ]   PDE1A [ MEM ]
Gene Expression Viewer (FireBrowse)PDE1A [ Firebrowse - Broad ]
GenevisibleExpression of PDE1A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5136
GTEX Portal (Tissue expression)PDE1A
Human Protein AtlasENSG00000115252-PDE1A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PDE1A
Human Protein Atlas [tissue]ENSG00000115252-PDE1A [tissue]
HPRD01387
Protein Interaction databases
BioGRIDPDE1A
STRING (EMBL)PDE1A
ZODIACPDE1A
Ontologies - Pathways
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPDE1A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:24:42 CEST 2021

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