Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PDE4DIPP1 (phosphodiesterase 4D interacting protein pseudogene 1)

Identity

Other aliasPDE4DIP1
HGNC (Hugo) PDE4DIPP1
LocusID (NCBI) 728920
Atlas_Id 79356
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 148049302 and ends at 148094777 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PDE4DIPP1   50867
Cards
Entrez_Gene (NCBI)PDE4DIPP1  728920  phosphodiesterase 4D interacting protein pseudogene 1
AliasesPDE4DIP1
GeneCards (Weizmann)PDE4DIPP1
Ensembl hg19 (Hinxton)ENSG00000229828 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229828 [Gene_View]  chr1:148049302-148094777 [Contig_View]  PDE4DIPP1 [Vega]
ICGC DataPortalENSG00000229828
TCGA cBioPortalPDE4DIPP1
AceView (NCBI)PDE4DIPP1
Genatlas (Paris)PDE4DIPP1
WikiGenes728920
SOURCE (Princeton)PDE4DIPP1
Genetics Home Reference (NIH)PDE4DIPP1
Genomic and cartography
GoldenPath hg38 (UCSC)PDE4DIPP1  -     chr1:148049302-148094777 +  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PDE4DIPP1  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblPDE4DIPP1 - 1q21.2 [CytoView hg19]  PDE4DIPP1 - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBIPDE4DIPP1 [Mapview hg19]  PDE4DIPP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PDE4DIPP1
Alternative Splicing GalleryENSG00000229828
Gene ExpressionPDE4DIPP1 [ NCBI-GEO ]   PDE4DIPP1 [ EBI - ARRAY_EXPRESS ]   PDE4DIPP1 [ SEEK ]   PDE4DIPP1 [ MEM ]
Gene Expression Viewer (FireBrowse)PDE4DIPP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728920
GTEX Portal (Tissue expression)PDE4DIPP1
Human Protein AtlasENSG00000229828-PDE4DIPP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PDE4DIPP1
DMDM Disease mutations728920
Blocks (Seattle)PDE4DIPP1
Human Protein Atlas [tissue]ENSG00000229828-PDE4DIPP1 [tissue]
Protein Interaction databases
FunCoupENSG00000229828
BioGRIDPDE4DIPP1
STRING (EMBL)PDE4DIPP1
ZODIACPDE4DIPP1
Ontologies - Pathways
Huge Navigator PDE4DIPP1 [HugePedia]
snp3D : Map Gene to Disease728920
BioCentury BCIQPDE4DIPP1
ClinGenPDE4DIPP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728920
Clinical trialPDE4DIPP1
Miscellaneous
canSAR (ICR)PDE4DIPP1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePDE4DIPP1
EVEXPDE4DIPP1
GoPubMedPDE4DIPP1
iHOPPDE4DIPP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:18 CET 2017

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