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PDE8A (phosphodiesterase 8A)

Identity

Alias (NCBI)HsT19550
HGNC (Hugo) PDE8A
HGNC Alias symbHsT19550
LocusID (NCBI) 5151
Atlas_Id 71800
Location 15q25.3  [Link to chromosome band 15q25]
Location_base_pair Starts at 84981974 and ends at 85139141 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AKAP13 (15q25.3) / PDE8A (15q25.3)FAM20A (17q24.2) / PDE8A (15q25.3)PDE8A (15q25.3) / IPO5 (13q32.2)
PDE8A (15q25.3) / PDE8A (15q25.3)PDE8A (15q25.3) / SLC28A1 (15q25.3)PDE8A (15q25.3) / SND1 (7q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PDE8A   8793
Cards
Entrez_Gene (NCBI)PDE8A    phosphodiesterase 8A
AliasesHsT19550
GeneCards (Weizmann)PDE8A
Ensembl hg19 (Hinxton)ENSG00000073417 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000073417 [Gene_View]  ENSG00000073417 [Sequence]  chr15:84981974-85139141 [Contig_View]  PDE8A [Vega]
ICGC DataPortalENSG00000073417
TCGA cBioPortalPDE8A
AceView (NCBI)PDE8A
Genatlas (Paris)PDE8A
SOURCE (Princeton)PDE8A
Genetics Home Reference (NIH)PDE8A
Genomic and cartography
GoldenPath hg38 (UCSC)PDE8A  -     chr15:84981974-85139141 +  15q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PDE8A  -     15q25.3   [Description]    (hg19-Feb_2009)
GoldenPathPDE8A - 15q25.3 [CytoView hg19]  PDE8A - 15q25.3 [CytoView hg38]
ImmunoBaseENSG00000073417
Genome Data Viewer NCBIPDE8A [Mapview hg19]  
OMIM602972   
Gene and transcription
Genbank (Entrez)AF056490 AF332653 AF388183 AF388184 AF388185
RefSeq transcript (Entrez)NM_001243137 NM_002605 NM_173454 NM_173455 NM_173456 NM_173457
Consensus coding sequences : CCDS (NCBI)PDE8A
Gene ExpressionPDE8A [ NCBI-GEO ]   PDE8A [ EBI - ARRAY_EXPRESS ]   PDE8A [ SEEK ]   PDE8A [ MEM ]
Gene Expression Viewer (FireBrowse)PDE8A [ Firebrowse - Broad ]
GenevisibleExpression of PDE8A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5151
GTEX Portal (Tissue expression)PDE8A
Human Protein AtlasENSG00000073417-PDE8A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PDE8A
Human Protein Atlas [tissue]ENSG00000073417-PDE8A [tissue]
HPRD09114
Protein Interaction databases
BioGRIDPDE8A
STRING (EMBL)PDE8A
ZODIACPDE8A
Ontologies - Pathways
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPDE8A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:15:49 CEST 2021

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