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PDILT (protein disulfide isomerase like, testis expressed)

Identity

Alias (NCBI)PDIA7
HGNC (Hugo) PDILT
HGNC Alias symbPDIA7
HGNC Alias nameprotein disulfide isomerase family A, member 7
 protein disulfide isomerase-like protein of the testis
HGNC Previous nameprotein disulfide isomerase-like, testis expressed
LocusID (NCBI) 204474
Atlas_Id 71804
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 20359175 and ends at 20404737 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LOC100289187 () / PDILT (16p12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PDILT   27338
Cards
Entrez_Gene (NCBI)PDILT    protein disulfide isomerase like, testis expressed
AliasesPDIA7
GeneCards (Weizmann)PDILT
Ensembl hg19 (Hinxton)ENSG00000169340 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169340 [Gene_View]  ENSG00000169340 [Sequence]  chr16:20359175-20404737 [Contig_View]  PDILT [Vega]
ICGC DataPortalENSG00000169340
TCGA cBioPortalPDILT
AceView (NCBI)PDILT
Genatlas (Paris)PDILT
SOURCE (Princeton)PDILT
Genetics Home Reference (NIH)PDILT
Genomic and cartography
GoldenPath hg38 (UCSC)PDILT  -     chr16:20359175-20404737 -  16p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PDILT  -     16p12.3   [Description]    (hg19-Feb_2009)
GoldenPathPDILT - 16p12.3 [CytoView hg19]  PDILT - 16p12.3 [CytoView hg38]
ImmunoBaseENSG00000169340
Genome Data Viewer NCBIPDILT [Mapview hg19]  
OMIM618588   
Gene and transcription
Genbank (Entrez)AK097476 BC042607 BC044936
RefSeq transcript (Entrez)NM_174924
Consensus coding sequences : CCDS (NCBI)PDILT
Gene ExpressionPDILT [ NCBI-GEO ]   PDILT [ EBI - ARRAY_EXPRESS ]   PDILT [ SEEK ]   PDILT [ MEM ]
Gene Expression Viewer (FireBrowse)PDILT [ Firebrowse - Broad ]
GenevisibleExpression of PDILT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)204474
GTEX Portal (Tissue expression)PDILT
Human Protein AtlasENSG00000169340-PDILT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N807   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N807  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N807
PhosPhoSitePlusQ8N807
Domaine pattern : Prosite (Expaxy)ER_TARGET (PS00014)    THIOREDOXIN_2 (PS51352)   
Domains : Interpro (EBI)Thioredoxin-like_sf    Thioredoxin_domain   
Domain families : Pfam (Sanger)Thioredoxin (PF00085)   
Domain families : Pfam (NCBI)pfam00085   
Conserved Domain (NCBI)PDILT
PDB (RSDB)4NWY    5XF7   
PDB Europe4NWY    5XF7   
PDB (PDBSum)4NWY    5XF7   
PDB (IMB)4NWY    5XF7   
Structural Biology KnowledgeBase4NWY    5XF7   
SCOP (Structural Classification of Proteins)4NWY    5XF7   
CATH (Classification of proteins structures)4NWY    5XF7   
SuperfamilyQ8N807
AlphaFold pdb e-kbQ8N807   
Human Protein Atlas [tissue]ENSG00000169340-PDILT [tissue]
HPRD15111
Protein Interaction databases
DIP (DOE-UCLA)Q8N807
IntAct (EBI)Q8N807
BioGRIDPDILT
STRING (EMBL)PDILT
ZODIACPDILT
Ontologies - Pathways
QuickGOQ8N807
Ontology : AmiGOprotein disulfide isomerase activity  endoplasmic reticulum  protein folding  multicellular organism development  spermatid development  cell migration  
Ontology : EGO-EBIprotein disulfide isomerase activity  endoplasmic reticulum  protein folding  multicellular organism development  spermatid development  cell migration  
NDEx NetworkPDILT
Atlas of Cancer Signalling NetworkPDILT
Wikipedia pathwaysPDILT
Orthology - Evolution
OrthoDB204474
GeneTree (enSembl)ENSG00000169340
Phylogenetic Trees/Animal Genes : TreeFamPDILT
Homologs : HomoloGenePDILT
Homology/Alignments : Family Browser (UCSC)PDILT
Gene fusions - Rearrangements
Fusion : QuiverPDILT
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPDILT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PDILT
dbVarPDILT
ClinVarPDILT
MonarchPDILT
1000_GenomesPDILT 
Exome Variant ServerPDILT
GNOMAD BrowserENSG00000169340
Varsome BrowserPDILT
ACMGPDILT variants
VarityQ8N807
Genomic Variants (DGV)PDILT [DGVbeta]
DECIPHERPDILT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPDILT 
Mutations
ICGC Data PortalPDILT 
TCGA Data PortalPDILT 
Broad Tumor PortalPDILT
OASIS PortalPDILT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPDILT  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPDILT
Mutations and Diseases : HGMDPDILT
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPDILT
DgiDB (Drug Gene Interaction Database)PDILT
DoCM (Curated mutations)PDILT
CIViC (Clinical Interpretations of Variants in Cancer)PDILT
Cancer3DPDILT
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618588   
Orphanet
DisGeNETPDILT
MedgenPDILT
Genetic Testing Registry PDILT
NextProtQ8N807 [Medical]
GENETestsPDILT
Target ValidationPDILT
Huge Navigator PDILT [HugePedia]
ClinGenPDILT
Clinical trials, drugs, therapy
MyCancerGenomePDILT
Protein Interactions : CTDPDILT
Pharm GKB GenePA164724442
PharosQ8N807
Clinical trialPDILT
Miscellaneous
canSAR (ICR)PDILT
HarmonizomePDILT
DataMed IndexPDILT
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPDILT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:15:49 CEST 2021

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