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PDX1-AS1 (-)

Identity

Alias_namesPDX1 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)PLUTO
HI-LNC71
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100861550
Atlas_Id 71809
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PDX1-AS1  100861550  -
Aliases
GeneCards (Weizmann)PDX1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  PDX1-AS1 [Vega]
TCGA cBioPortalPDX1-AS1
AceView (NCBI)PDX1-AS1
Genatlas (Paris)PDX1-AS1
WikiGenes100861550
SOURCE (Princeton)PDX1-AS1
Genetics Home Reference (NIH)PDX1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PDX1-AS1  -  
GoldenPath hg19 (UCSC)PDX1-AS1  -  
EnsemblPDX1-AS1 - [CytoView hg19]  PDX1-AS1 - [CytoView hg38]
Mapping of homologs : NCBIPDX1-AS1 [Mapview hg19]  PDX1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PDX1-AS1
Gene ExpressionPDX1-AS1 [ NCBI-GEO ]   PDX1-AS1 [ EBI - ARRAY_EXPRESS ]   PDX1-AS1 [ SEEK ]   PDX1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PDX1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861550
GTEX Portal (Tissue expression)PDX1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PDX1-AS1
DMDM Disease mutations100861550
Blocks (Seattle)PDX1-AS1
Protein Interaction databases
BioGRIDPDX1-AS1
STRING (EMBL)PDX1-AS1
ZODIACPDX1-AS1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100861550
BioCentury BCIQPDX1-AS1
ClinGenPDX1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861550
Clinical trialPDX1-AS1
Miscellaneous
canSAR (ICR)PDX1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePDX1-AS1
EVEXPDX1-AS1
GoPubMedPDX1-AS1
iHOPPDX1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:58:36 CET 2017

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jlhuret@AtlasGeneticsOncology.org.