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PDYN-AS1 (PDYN antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PDYN-AS1
LocusID (NCBI) 727993
Atlas_Id 79919
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 1947210 and ends at 2007517 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PDYN-AS1   53462
Cards
Entrez_Gene (NCBI)PDYN-AS1  727993  PDYN antisense RNA 1
Aliases
GeneCards (Weizmann)PDYN-AS1
Ensembl hg19 (Hinxton)ENSG00000233896 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233896 [Gene_View]  chr20:1947210-2007517 [Contig_View]  PDYN-AS1 [Vega]
ICGC DataPortalENSG00000233896
TCGA cBioPortalPDYN-AS1
AceView (NCBI)PDYN-AS1
Genatlas (Paris)PDYN-AS1
WikiGenes727993
SOURCE (Princeton)PDYN-AS1
Genetics Home Reference (NIH)PDYN-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PDYN-AS1  -     chr20:1947210-2007517 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PDYN-AS1  -     20p13   [Description]    (hg19-Feb_2009)
EnsemblPDYN-AS1 - 20p13 [CytoView hg19]  PDYN-AS1 - 20p13 [CytoView hg38]
Mapping of homologs : NCBIPDYN-AS1 [Mapview hg19]  PDYN-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090681 DT217271
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PDYN-AS1
Cluster EST : UnigeneHs.551466 [ NCBI ]
CGAP (NCI)Hs.551466
Alternative Splicing GalleryENSG00000233896
Gene ExpressionPDYN-AS1 [ NCBI-GEO ]   PDYN-AS1 [ EBI - ARRAY_EXPRESS ]   PDYN-AS1 [ SEEK ]   PDYN-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PDYN-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)727993
GTEX Portal (Tissue expression)PDYN-AS1
Human Protein AtlasENSG00000233896-PDYN-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PDYN-AS1
DMDM Disease mutations727993
Blocks (Seattle)PDYN-AS1
Human Protein Atlas [tissue]ENSG00000233896-PDYN-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000233896
BioGRIDPDYN-AS1
STRING (EMBL)PDYN-AS1
ZODIACPDYN-AS1
Ontologies - Pathways
Huge Navigator PDYN-AS1 [HugePedia]
snp3D : Map Gene to Disease727993
BioCentury BCIQPDYN-AS1
ClinGenPDYN-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727993
Clinical trialPDYN-AS1
Miscellaneous
canSAR (ICR)PDYN-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePDYN-AS1
EVEXPDYN-AS1
GoPubMedPDYN-AS1
iHOPPDYN-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:42:06 CET 2017

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