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PDZRN3-AS1 (PDZRN3 antisense RNA 1)

Identity

Alias_namesPDZRN3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) PDZRN3-AS1
LocusID (NCBI) 101927249
Atlas_Id 71821
Location 3p13  [Link to chromosome band 3p13]
Location_base_pair Starts at 73623568 and ends at 73627899 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PDZRN3-AS1   40814
Cards
Entrez_Gene (NCBI)PDZRN3-AS1  101927249  PDZRN3 antisense RNA 1
Aliases
GeneCards (Weizmann)PDZRN3-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:73623568-73627899 [Contig_View]  PDZRN3-AS1 [Vega]
TCGA cBioPortalPDZRN3-AS1
AceView (NCBI)PDZRN3-AS1
Genatlas (Paris)PDZRN3-AS1
WikiGenes101927249
SOURCE (Princeton)PDZRN3-AS1
Genetics Home Reference (NIH)PDZRN3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PDZRN3-AS1  -     chr3:73623568-73627899 +  3p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PDZRN3-AS1  -     3p13   [Description]    (hg19-Feb_2009)
EnsemblPDZRN3-AS1 - 3p13 [CytoView hg19]  PDZRN3-AS1 - 3p13 [CytoView hg38]
Mapping of homologs : NCBIPDZRN3-AS1 [Mapview hg19]  PDZRN3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126423 AL692084
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PDZRN3-AS1
Cluster EST : UnigeneHs.743998 [ NCBI ]
CGAP (NCI)Hs.743998
Gene ExpressionPDZRN3-AS1 [ NCBI-GEO ]   PDZRN3-AS1 [ EBI - ARRAY_EXPRESS ]   PDZRN3-AS1 [ SEEK ]   PDZRN3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PDZRN3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927249
GTEX Portal (Tissue expression)PDZRN3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PDZRN3-AS1
DMDM Disease mutations101927249
Blocks (Seattle)PDZRN3-AS1
Protein Interaction databases
BioGRIDPDZRN3-AS1
STRING (EMBL)PDZRN3-AS1
ZODIACPDZRN3-AS1
Ontologies - Pathways
Huge Navigator PDZRN3-AS1 [HugePedia]
snp3D : Map Gene to Disease101927249
BioCentury BCIQPDZRN3-AS1
ClinGenPDZRN3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927249
Clinical trialPDZRN3-AS1
Miscellaneous
canSAR (ICR)PDZRN3-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePDZRN3-AS1
EVEXPDZRN3-AS1
GoPubMedPDZRN3-AS1
iHOPPDZRN3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:36:02 CEST 2017

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