Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PEAK3 (PEAK family member 3)

Identity

Alias_namesC19orf35
chromosome 19 open reading frame 35
Alias_symbol (synonym)FLJ45778
Other alias
HGNC (Hugo) PEAK3
LocusID (NCBI) 374872
Atlas_Id 78853
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 2274632 and ends at 2282182 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PEAK3   24793
Cards
Entrez_Gene (NCBI)PEAK3  374872  PEAK family member 3
AliasesC19orf35
GeneCards (Weizmann)PEAK3
Ensembl hg19 (Hinxton)ENSG00000188305 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188305 [Gene_View]  chr19:2274632-2282182 [Contig_View]  PEAK3 [Vega]
ICGC DataPortalENSG00000188305
TCGA cBioPortalPEAK3
AceView (NCBI)PEAK3
Genatlas (Paris)PEAK3
WikiGenes374872
SOURCE (Princeton)PEAK3
Genetics Home Reference (NIH)PEAK3
Genomic and cartography
GoldenPath hg38 (UCSC)PEAK3  -     chr19:2274632-2282182 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PEAK3  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblPEAK3 - 19p13.3 [CytoView hg19]  PEAK3 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIPEAK3 [Mapview hg19]  PEAK3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127680 BC107678
RefSeq transcript (Entrez)NM_198532
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PEAK3
Cluster EST : UnigeneHs.511803 [ NCBI ]
CGAP (NCI)Hs.511803
Alternative Splicing GalleryENSG00000188305
Gene ExpressionPEAK3 [ NCBI-GEO ]   PEAK3 [ EBI - ARRAY_EXPRESS ]   PEAK3 [ SEEK ]   PEAK3 [ MEM ]
Gene Expression Viewer (FireBrowse)PEAK3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374872
GTEX Portal (Tissue expression)PEAK3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZS72   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZS72  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZS72
Splice isoforms : SwissVarQ6ZS72
PhosPhoSitePlusQ6ZS72
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PEAK3
DMDM Disease mutations374872
Blocks (Seattle)PEAK3
SuperfamilyQ6ZS72
Human Protein AtlasENSG00000188305
Peptide AtlasQ6ZS72
IPIIPI00796957   IPI00867611   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZS72
IntAct (EBI)Q6ZS72
FunCoupENSG00000188305
BioGRIDPEAK3
STRING (EMBL)PEAK3
ZODIACPEAK3
Ontologies - Pathways
QuickGOQ6ZS72
Ontology : AmiGOprotein kinase activity  focal adhesion  protein phosphorylation  actin cytoskeleton  
Ontology : EGO-EBIprotein kinase activity  focal adhesion  protein phosphorylation  actin cytoskeleton  
NDEx NetworkPEAK3
Atlas of Cancer Signalling NetworkPEAK3
Wikipedia pathwaysPEAK3
Orthology - Evolution
OrthoDB374872
GeneTree (enSembl)ENSG00000188305
Phylogenetic Trees/Animal Genes : TreeFamPEAK3
HOVERGENQ6ZS72
HOGENOMQ6ZS72
Homologs : HomoloGenePEAK3
Homology/Alignments : Family Browser (UCSC)PEAK3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPEAK3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PEAK3
dbVarPEAK3
ClinVarPEAK3
1000_GenomesPEAK3 
Exome Variant ServerPEAK3
ExAC (Exome Aggregation Consortium)PEAK3 (select the gene name)
Genetic variants : HAPMAP374872
Genomic Variants (DGV)PEAK3 [DGVbeta]
DECIPHERPEAK3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPEAK3 
Mutations
ICGC Data PortalPEAK3 
TCGA Data PortalPEAK3 
Broad Tumor PortalPEAK3
OASIS PortalPEAK3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPEAK3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PEAK3
DgiDB (Drug Gene Interaction Database)PEAK3
DoCM (Curated mutations)PEAK3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PEAK3 (select a term)
intoGenPEAK3
Cancer3DPEAK3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPEAK3
Genetic Testing Registry PEAK3
NextProtQ6ZS72 [Medical]
TSGene374872
GENETestsPEAK3
Target ValidationPEAK3
Huge Navigator PEAK3 [HugePedia]
snp3D : Map Gene to Disease374872
BioCentury BCIQPEAK3
ClinGenPEAK3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374872
Chemical/Pharm GKB GenePA134922698
Clinical trialPEAK3
Miscellaneous
canSAR (ICR)PEAK3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePEAK3
EVEXPEAK3
GoPubMedPEAK3
iHOPPEAK3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:34:18 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.