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PEBP4 (phosphatidylethanolamine binding protein 4)

Identity

Alias (NCBI)CORK-1
CORK1
GWTM1933
HEL-S-300
PEBP-4
PRO4408
hPEBP4
HGNC (Hugo) PEBP4
HGNC Alias symbMGC22776
CORK1
hPEBP4
HGNC Alias namecousin-of-RKIP 1 protein
LocusID (NCBI) 157310
Atlas_Id 46027
Location 8p21.3  [Link to chromosome band 8p21]
Location_base_pair Starts at 22713251 and ends at 22927914 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AL139022.1 ()::PEBP4 (8p21.3)BIN3 (8p21.3)::PEBP4 (8p21.3)PEBP4 (8p21.3)::APLF (2p13.3)
PEBP4 (8p21.3)::HYOU1 (11q23.3)PEBP4 (8p21.3)::UNC5D (8p12)AL139022.1 PEBP4 8p21.3
BIN3 8p21.3::PEBP4 8p21.3PEBP4 8p21.3::UNC5D 8p12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PEBP4   28319
Cards
Entrez_Gene (NCBI)PEBP4    phosphatidylethanolamine binding protein 4
AliasesCORK-1; CORK1; GWTM1933; HEL-S-300; 
PEBP-4; PRO4408; hPEBP4
GeneCards (Weizmann)PEBP4
Ensembl hg19 (Hinxton)ENSG00000134020 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134020 [Gene_View]  ENSG00000134020 [Sequence]  chr8:22713251-22927914 [Contig_View]  PEBP4 [Vega]
ICGC DataPortalENSG00000134020
TCGA cBioPortalPEBP4
AceView (NCBI)PEBP4
Genatlas (Paris)PEBP4
SOURCE (Princeton)PEBP4
Genetics Home Reference (NIH)PEBP4
Genomic and cartography
GoldenPath hg38 (UCSC)PEBP4  -     chr8:22713251-22927914 -  8p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PEBP4  -     8p21.3   [Description]    (hg19-Feb_2009)
GoldenPathPEBP4 - 8p21.3 [CytoView hg19]  PEBP4 - 8p21.3 [CytoView hg38]
ImmunoBaseENSG00000134020
Genome Data Viewer NCBIPEBP4 [Mapview hg19]  
OMIM612473   
Gene and transcription
Genbank (Entrez)AY037148 AY359109 AY730275 BC020779 BF853000
RefSeq transcript (Entrez)NM_001363233 NM_144962
Consensus coding sequences : CCDS (NCBI)PEBP4
Gene ExpressionPEBP4 [ NCBI-GEO ]   PEBP4 [ EBI - ARRAY_EXPRESS ]   PEBP4 [ SEEK ]   PEBP4 [ MEM ]
Gene Expression Viewer (FireBrowse)PEBP4 [ Firebrowse - Broad ]
GenevisibleExpression of PEBP4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)157310
GTEX Portal (Tissue expression)PEBP4
Human Protein AtlasENSG00000134020-PEBP4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96S96   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96S96  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96S96
PhosPhoSitePlusQ96S96
Domaine pattern : Prosite (Expaxy)PBP (PS01220)   
Domains : Interpro (EBI)PEBP    PEBP-like_sf    PEBP_euk    Phosphatidylethanolamine-bd_CS   
Domain families : Pfam (Sanger)PBP (PF01161)   
Domain families : Pfam (NCBI)pfam01161   
Conserved Domain (NCBI)PEBP4
SuperfamilyQ96S96
AlphaFold pdb e-kbQ96S96   
Human Protein Atlas [tissue]ENSG00000134020-PEBP4 [tissue]
HPRD11424
Protein Interaction databases
DIP (DOE-UCLA)Q96S96
IntAct (EBI)Q96S96
BioGRIDPEBP4
STRING (EMBL)PEBP4
ZODIACPEBP4
Ontologies - Pathways
QuickGOQ96S96
Ontology : AmiGOprotein binding  lysosome  extracellular exosome  
Ontology : EGO-EBIprotein binding  lysosome  extracellular exosome  
NDEx NetworkPEBP4
Atlas of Cancer Signalling NetworkPEBP4
Wikipedia pathwaysPEBP4
Orthology - Evolution
OrthoDB157310
GeneTree (enSembl)ENSG00000134020
Phylogenetic Trees/Animal Genes : TreeFamPEBP4
Homologs : HomoloGenePEBP4
Homology/Alignments : Family Browser (UCSC)PEBP4
Gene fusions - Rearrangements
Fusion : MitelmanBIN3::PEBP4 [8p21.3/8p21.3]  
Fusion : MitelmanPEBP4::UNC5D [8p21.3/8p12]  
Fusion : QuiverPEBP4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPEBP4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PEBP4
dbVarPEBP4
ClinVarPEBP4
MonarchPEBP4
1000_GenomesPEBP4 
Exome Variant ServerPEBP4
GNOMAD BrowserENSG00000134020
Varsome BrowserPEBP4
ACMGPEBP4 variants
VarityQ96S96
Genomic Variants (DGV)PEBP4 [DGVbeta]
DECIPHERPEBP4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPEBP4 
Mutations
ICGC Data PortalPEBP4 
TCGA Data PortalPEBP4 
Broad Tumor PortalPEBP4
OASIS PortalPEBP4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPEBP4  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPEBP4
Mutations and Diseases : HGMDPEBP4
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPEBP4
DgiDB (Drug Gene Interaction Database)PEBP4
DoCM (Curated mutations)PEBP4
CIViC (Clinical Interpretations of Variants in Cancer)PEBP4
Cancer3DPEBP4
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612473   
Orphanet
DisGeNETPEBP4
MedgenPEBP4
Genetic Testing Registry PEBP4
NextProtQ96S96 [Medical]
GENETestsPEBP4
Target ValidationPEBP4
Huge Navigator PEBP4 [HugePedia]
ClinGenPEBP4
Clinical trials, drugs, therapy
MyCancerGenomePEBP4
Protein Interactions : CTDPEBP4
Pharm GKB GenePA165585814
PharosQ96S96
Clinical trialPEBP4
Miscellaneous
canSAR (ICR)PEBP4
HarmonizomePEBP4
ARCHS4PEBP4
DataMed IndexPEBP4
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPEBP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sun Jan 16 18:27:00 CET 2022

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