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PET100 (PET100 homolog)

Identity

Alias_namesC19orf79
chromosome 19 open reading frame 79
PET100 homolog (S. cerevisiae)
Other alias
HGNC (Hugo) PET100
LocusID (NCBI) 100131801
Atlas_Id 71829
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 7629785 and ends at 7631624 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PET100   40038
Cards
Entrez_Gene (NCBI)PET100  100131801  PET100 homolog
AliasesC19orf79
GeneCards (Weizmann)PET100
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:7629785-7631624 [Contig_View]  PET100 [Vega]
TCGA cBioPortalPET100
AceView (NCBI)PET100
Genatlas (Paris)PET100
WikiGenes100131801
SOURCE (Princeton)PET100
Genetics Home Reference (NIH)PET100
Genomic and cartography
GoldenPath hg38 (UCSC)PET100  -     chr19:7629785-7631624 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PET100  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblPET100 - 19p13.2 [CytoView hg19]  PET100 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIPET100 [Mapview hg19]  PET100 [Mapview hg38]
OMIM220110   614770   
Gene and transcription
Genbank (Entrez)AK124717 AW009489 BC150496 BU740873 CB119056
RefSeq transcript (Entrez)NM_001171155
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PET100
Cluster EST : UnigeneHs.728837 [ NCBI ]
CGAP (NCI)Hs.728837
Gene ExpressionPET100 [ NCBI-GEO ]   PET100 [ EBI - ARRAY_EXPRESS ]   PET100 [ SEEK ]   PET100 [ MEM ]
Gene Expression Viewer (FireBrowse)PET100 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100131801
GTEX Portal (Tissue expression)PET100
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DJ07   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DJ07  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DJ07
Splice isoforms : SwissVarP0DJ07
PhosPhoSitePlusP0DJ07
Domains : Interpro (EBI)Pet100   
Domain families : Pfam (Sanger)DUF2346 (PF09803)   
Domain families : Pfam (NCBI)pfam09803   
Conserved Domain (NCBI)PET100
DMDM Disease mutations100131801
Blocks (Seattle)PET100
SuperfamilyP0DJ07
Peptide AtlasP0DJ07
IPIIPI00640118   
Protein Interaction databases
DIP (DOE-UCLA)P0DJ07
IntAct (EBI)P0DJ07
BioGRIDPET100
STRING (EMBL)PET100
ZODIACPET100
Ontologies - Pathways
QuickGOP0DJ07
Ontology : AmiGOintegral component of mitochondrial inner membrane  mitochondrial respiratory chain complex IV assembly  unfolded protein binding  
Ontology : EGO-EBIintegral component of mitochondrial inner membrane  mitochondrial respiratory chain complex IV assembly  unfolded protein binding  
NDEx NetworkPET100
Atlas of Cancer Signalling NetworkPET100
Wikipedia pathwaysPET100
Orthology - Evolution
OrthoDB100131801
Phylogenetic Trees/Animal Genes : TreeFamPET100
HOVERGENP0DJ07
HOGENOMP0DJ07
Homologs : HomoloGenePET100
Homology/Alignments : Family Browser (UCSC)PET100
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPET100 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PET100
dbVarPET100
ClinVarPET100
1000_GenomesPET100 
Exome Variant ServerPET100
ExAC (Exome Aggregation Consortium)PET100 (select the gene name)
Genetic variants : HAPMAP100131801
Genomic Variants (DGV)PET100 [DGVbeta]
DECIPHERPET100 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPET100 
Mutations
ICGC Data PortalPET100 
TCGA Data PortalPET100 
Broad Tumor PortalPET100
OASIS PortalPET100 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPET100  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPET100
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PET100
DgiDB (Drug Gene Interaction Database)PET100
DoCM (Curated mutations)PET100 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PET100 (select a term)
intoGenPET100
Cancer3DPET100(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM220110    614770   
Orphanet19814   
MedgenPET100
Genetic Testing Registry PET100
NextProtP0DJ07 [Medical]
TSGene100131801
GENETestsPET100
Target ValidationPET100
Huge Navigator PET100 [HugePedia]
snp3D : Map Gene to Disease100131801
BioCentury BCIQPET100
ClinGenPET100
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131801
Chemical/Pharm GKB GenePA166049058
Clinical trialPET100
Miscellaneous
canSAR (ICR)PET100 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePET100
EVEXPET100
GoPubMedPET100
iHOPPET100
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:34:19 CEST 2017

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