Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PEX5L-AS2 (PEX5L antisense RNA 2)

Identity

Alias_namesPEX5L antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) PEX5L-AS2
LocusID (NCBI) 101928790
Atlas_Id 77785
Location 3q26.33  [Link to chromosome band 3q26]
Location_base_pair Starts at 179898194 and ends at 179921899 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PEX5L-AS2   41252
Cards
Entrez_Gene (NCBI)PEX5L-AS2  101928790  PEX5L antisense RNA 2
Aliases
GeneCards (Weizmann)PEX5L-AS2
Ensembl hg19 (Hinxton)ENSG00000244302 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244302 [Gene_View]  chr3:179898194-179921899 [Contig_View]  PEX5L-AS2 [Vega]
ICGC DataPortalENSG00000244302
TCGA cBioPortalPEX5L-AS2
AceView (NCBI)PEX5L-AS2
Genatlas (Paris)PEX5L-AS2
WikiGenes101928790
SOURCE (Princeton)PEX5L-AS2
Genetics Home Reference (NIH)PEX5L-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)PEX5L-AS2  -     chr3:179898194-179921899 +  3q26.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PEX5L-AS2  -     3q26.33   [Description]    (hg19-Feb_2009)
EnsemblPEX5L-AS2 - 3q26.33 [CytoView hg19]  PEX5L-AS2 - 3q26.33 [CytoView hg38]
Mapping of homologs : NCBIPEX5L-AS2 [Mapview hg19]  PEX5L-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG186146 HY015924 HY048179 HY052832
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PEX5L-AS2
Cluster EST : UnigeneHs.667247 [ NCBI ]
CGAP (NCI)Hs.667247
Alternative Splicing GalleryENSG00000244302
Gene ExpressionPEX5L-AS2 [ NCBI-GEO ]   PEX5L-AS2 [ EBI - ARRAY_EXPRESS ]   PEX5L-AS2 [ SEEK ]   PEX5L-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)PEX5L-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928790
GTEX Portal (Tissue expression)PEX5L-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PEX5L-AS2
DMDM Disease mutations101928790
Blocks (Seattle)PEX5L-AS2
Human Protein AtlasENSG00000244302
Protein Interaction databases
FunCoupENSG00000244302
BioGRIDPEX5L-AS2
STRING (EMBL)PEX5L-AS2
ZODIACPEX5L-AS2
Ontologies - Pathways
Huge Navigator PEX5L-AS2 [HugePedia]
snp3D : Map Gene to Disease101928790
BioCentury BCIQPEX5L-AS2
ClinGenPEX5L-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928790
Clinical trialPEX5L-AS2
Miscellaneous
canSAR (ICR)PEX5L-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePEX5L-AS2
EVEXPEX5L-AS2
GoPubMedPEX5L-AS2
iHOPPEX5L-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:36:06 CEST 2017

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