Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PFN1P2 (profilin 1 pseudogene 2)

Identity

Alias_namesC1orf152
chromosome 1 open reading frame 152
Alias_symbol (synonym)COAS3
Other alias
HGNC (Hugo) PFN1P2
LocusID (NCBI) 767846
Atlas_Id 71848
Location 1p11.2  [Link to chromosome band 1p11]
Location_base_pair Starts at 120432204 and ends at 120434109 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PFN1P2   24298
Cards
Entrez_Gene (NCBI)PFN1P2  767846  profilin 1 pseudogene 2
AliasesC1orf152; COAS3
GeneCards (Weizmann)PFN1P2
Ensembl hg19 (Hinxton)ENSG00000270392 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270392 [Gene_View]  chr1:120432204-120434109 [Contig_View]  PFN1P2 [Vega]
ICGC DataPortalENSG00000270392
TCGA cBioPortalPFN1P2
AceView (NCBI)PFN1P2
Genatlas (Paris)PFN1P2
WikiGenes767846
SOURCE (Princeton)PFN1P2
Genetics Home Reference (NIH)PFN1P2
Genomic and cartography
GoldenPath hg38 (UCSC)PFN1P2  -     chr1:120432204-120434109 -  1p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PFN1P2  -     1p11.2   [Description]    (hg19-Feb_2009)
EnsemblPFN1P2 - 1p11.2 [CytoView hg19]  PFN1P2 - 1p11.2 [CytoView hg38]
Mapping of homologs : NCBIPFN1P2 [Mapview hg19]  PFN1P2 [Mapview hg38]
OMIM608609   
Gene and transcription
Genbank (Entrez)AF345651 BC137262
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PFN1P2
Cluster EST : UnigeneHs.657186 [ NCBI ]
CGAP (NCI)Hs.657186
Alternative Splicing GalleryENSG00000270392
Gene ExpressionPFN1P2 [ NCBI-GEO ]   PFN1P2 [ EBI - ARRAY_EXPRESS ]   PFN1P2 [ SEEK ]   PFN1P2 [ MEM ]
Gene Expression Viewer (FireBrowse)PFN1P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)767846
GTEX Portal (Tissue expression)PFN1P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PFN1P2
DMDM Disease mutations767846
Blocks (Seattle)PFN1P2
Human Protein AtlasENSG00000270392
IPIIPI00152571   
Protein Interaction databases
FunCoupENSG00000270392
BioGRIDPFN1P2
STRING (EMBL)PFN1P2
ZODIACPFN1P2
Ontologies - Pathways
Huge Navigator PFN1P2 [HugePedia]
snp3D : Map Gene to Disease767846
BioCentury BCIQPFN1P2
ClinGenPFN1P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD767846
Chemical/Pharm GKB GenePA142672469
Clinical trialPFN1P2
Miscellaneous
canSAR (ICR)PFN1P2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePFN1P2
EVEXPFN1P2
GoPubMedPFN1P2
iHOPPFN1P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:35:45 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.