Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PGGHG (protein-glucosylgalactosylhydroxylysine glucosidase)

Identity

Alias_namesATHL1
ATH1, acid trehalase-like 1 (yeast)
Alias_symbol (synonym)FLJ22635
Other alias
HGNC (Hugo) PGGHG
LocusID (NCBI) 80162
Atlas_Id 78527
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 289138 and ends at 295688 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PGGHG   26210
Cards
Entrez_Gene (NCBI)PGGHG  80162  protein-glucosylgalactosylhydroxylysine glucosidase
AliasesATHL1
GeneCards (Weizmann)PGGHG
Ensembl hg19 (Hinxton)ENSG00000142102 [Gene_View]  chr11:289138-295688 [Contig_View]  PGGHG [Vega]
Ensembl hg38 (Hinxton)ENSG00000142102 [Gene_View]  chr11:289138-295688 [Contig_View]  PGGHG [Vega]
ICGC DataPortalENSG00000142102
TCGA cBioPortalPGGHG
AceView (NCBI)PGGHG
Genatlas (Paris)PGGHG
WikiGenes80162
SOURCE (Princeton)PGGHG
Genetics Home Reference (NIH)PGGHG
Genomic and cartography
GoldenPath hg19 (UCSC)PGGHG  -     chr11:289138-295688 +  11p15.5   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PGGHG  -     11p15.5   [Description]    (hg38-Dec_2013)
EnsemblPGGHG - 11p15.5 [CytoView hg19]  PGGHG - 11p15.5 [CytoView hg38]
Mapping of homologs : NCBIPGGHG [Mapview hg19]  PGGHG [Mapview hg38]
OMIM617032   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_025092
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PGGHG
Cluster EST : UnigeneHs.353181 [ NCBI ]
CGAP (NCI)Hs.353181
Alternative Splicing GalleryENSG00000142102
Gene ExpressionPGGHG [ NCBI-GEO ]   PGGHG [ EBI - ARRAY_EXPRESS ]   PGGHG [ SEEK ]   PGGHG [ MEM ]
Gene Expression Viewer (FireBrowse)PGGHG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)80162
GTEX Portal (Tissue expression)PGGHG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PGGHG
DMDM Disease mutations80162
Blocks (Seattle)PGGHG
Human Protein AtlasENSG00000142102
HPRD07999
IPIIPI00152739   IPI00747166   IPI00386188   IPI00744190   IPI00917437   IPI00985088   IPI00973724   
Protein Interaction databases
FunCoupENSG00000142102
BioGRIDPGGHG
STRING (EMBL)PGGHG
ZODIACPGGHG
Ontologies - Pathways
Huge Navigator PGGHG [HugePedia]
snp3D : Map Gene to Disease80162
BioCentury BCIQPGGHG
ClinGenPGGHG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80162
Chemical/Pharm GKB GenePA142672576
Clinical trialPGGHG
Miscellaneous
canSAR (ICR)PGGHG (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePGGHG
EVEXPGGHG
GoPubMedPGGHG
iHOPPGGHG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:38:26 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.