Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PGM5P2 (phosphoglucomutase 5 pseudogene 2)

Identity

Other alias-
HGNC (Hugo) PGM5P2
LocusID (NCBI) 595135
Atlas_Id 71871
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 69080244 and ends at 69147854 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PGM5P2   18965
Cards
Entrez_Gene (NCBI)PGM5P2  595135  phosphoglucomutase 5 pseudogene 2
Aliases
GeneCards (Weizmann)PGM5P2
Ensembl hg19 (Hinxton)ENSG00000277778 [Gene_View]  chr9:69080244-69147854 [Contig_View]  PGM5P2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000277778 [Gene_View]  chr9:69080244-69147854 [Contig_View]  PGM5P2 [Vega]
ICGC DataPortalENSG00000277778
TCGA cBioPortalPGM5P2
AceView (NCBI)PGM5P2
Genatlas (Paris)PGM5P2
WikiGenes595135
SOURCE (Princeton)PGM5P2
Genetics Home Reference (NIH)PGM5P2
Genomic and cartography
GoldenPath hg19 (UCSC)PGM5P2  -     chr9:69080244-69147854 -  9q21.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PGM5P2  -     9q21.11   [Description]    (hg38-Dec_2013)
EnsemblPGM5P2 - 9q21.11 [CytoView hg19]  PGM5P2 - 9q21.11 [CytoView hg38]
Mapping of homologs : NCBIPGM5P2 [Mapview hg19]  PGM5P2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096159 BC007887 BC025351 LK938976
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929361
Consensus coding sequences : CCDS (NCBI)PGM5P2
Cluster EST : UnigeneHs.650460 [ NCBI ]
CGAP (NCI)Hs.650460
Alternative Splicing GalleryENSG00000277778
Gene ExpressionPGM5P2 [ NCBI-GEO ]   PGM5P2 [ EBI - ARRAY_EXPRESS ]   PGM5P2 [ SEEK ]   PGM5P2 [ MEM ]
Gene Expression Viewer (FireBrowse)PGM5P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)595135
GTEX Portal (Tissue expression)PGM5P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PGM5P2
DMDM Disease mutations595135
Blocks (Seattle)PGM5P2
Human Protein AtlasENSG00000277778
Protein Interaction databases
FunCoupENSG00000277778
BioGRIDPGM5P2
STRING (EMBL)PGM5P2
ZODIACPGM5P2
Ontologies - Pathways
Huge Navigator PGM5P2 [HugePedia]
snp3D : Map Gene to Disease595135
BioCentury BCIQPGM5P2
ClinGenPGM5P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD595135
Chemical/Pharm GKB GenePA142671179
Clinical trialPGM5P2
Miscellaneous
canSAR (ICR)PGM5P2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePGM5P2
EVEXPGM5P2
GoPubMedPGM5P2
iHOPPGM5P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:38:29 CET 2017

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