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PHYHIP (phytanoyl-CoA 2-hydroxylase interacting protein)

Identity

Alias_namesDYRK1AP3
phytanoyl-CoA hydroxylase interacting protein
DYRK1A interacting protein 3
Alias_symbol (synonym)KIAA0273
PAHX-AP
Other aliasPAHXAP1
HGNC (Hugo) PHYHIP
LocusID (NCBI) 9796
Atlas_Id 71898
Location 8p21.3  [Link to chromosome band 8p21]
Location_base_pair Starts at 22077216 and ends at 22089851 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PHYHIP (8p21.3) / OSER1 (20q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PHYHIP   16865
Cards
Entrez_Gene (NCBI)PHYHIP  9796  phytanoyl-CoA 2-hydroxylase interacting protein
AliasesDYRK1AP3; PAHX-AP; PAHXAP1
GeneCards (Weizmann)PHYHIP
Ensembl hg19 (Hinxton)ENSG00000168490 [Gene_View]  chr8:22077216-22089851 [Contig_View]  PHYHIP [Vega]
Ensembl hg38 (Hinxton)ENSG00000168490 [Gene_View]  chr8:22077216-22089851 [Contig_View]  PHYHIP [Vega]
ICGC DataPortalENSG00000168490
TCGA cBioPortalPHYHIP
AceView (NCBI)PHYHIP
Genatlas (Paris)PHYHIP
WikiGenes9796
SOURCE (Princeton)PHYHIP
Genetics Home Reference (NIH)PHYHIP
Genomic and cartography
GoldenPath hg19 (UCSC)PHYHIP  -     chr8:22077216-22089851 -  8p21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PHYHIP  -     8p21.3   [Description]    (hg38-Dec_2013)
EnsemblPHYHIP - 8p21.3 [CytoView hg19]  PHYHIP - 8p21.3 [CytoView hg38]
Mapping of homologs : NCBIPHYHIP [Mapview hg19]  PHYHIP [Mapview hg38]
OMIM608511   
Gene and transcription
Genbank (Entrez)AK098743 AK294372 BC034034 BC035940 BM674072
RefSeq transcript (Entrez)NM_001099335 NM_014759
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_167187 NW_004929337
Consensus coding sequences : CCDS (NCBI)PHYHIP
Cluster EST : UnigeneHs.334688 [ NCBI ]
CGAP (NCI)Hs.334688
Alternative Splicing GalleryENSG00000168490
Gene ExpressionPHYHIP [ NCBI-GEO ]   PHYHIP [ EBI - ARRAY_EXPRESS ]   PHYHIP [ SEEK ]   PHYHIP [ MEM ]
Gene Expression Viewer (FireBrowse)PHYHIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9796
GTEX Portal (Tissue expression)PHYHIP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92561   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92561  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92561
Splice isoforms : SwissVarQ92561
PhosPhoSitePlusQ92561
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)   
Domains : Interpro (EBI)FN3_dom    Ig-like_fold   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)FN3 (SM00060)  
Conserved Domain (NCBI)PHYHIP
DMDM Disease mutations9796
Blocks (Seattle)PHYHIP
SuperfamilyQ92561
Human Protein AtlasENSG00000168490
Peptide AtlasQ92561
HPRD16345
IPIIPI00022021   IPI00910726   IPI00980530   
Protein Interaction databases
DIP (DOE-UCLA)Q92561
IntAct (EBI)Q92561
FunCoupENSG00000168490
BioGRIDPHYHIP
STRING (EMBL)PHYHIP
ZODIACPHYHIP
Ontologies - Pathways
QuickGOQ92561
Ontology : AmiGOpositive regulation of defense response to virus by host  activation of mitophagy in response to mitochondrial depolarization  
Ontology : EGO-EBIpositive regulation of defense response to virus by host  activation of mitophagy in response to mitochondrial depolarization  
NDEx NetworkPHYHIP
Atlas of Cancer Signalling NetworkPHYHIP
Wikipedia pathwaysPHYHIP
Orthology - Evolution
OrthoDB9796
GeneTree (enSembl)ENSG00000168490
Phylogenetic Trees/Animal Genes : TreeFamPHYHIP
HOVERGENQ92561
HOGENOMQ92561
Homologs : HomoloGenePHYHIP
Homology/Alignments : Family Browser (UCSC)PHYHIP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPHYHIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PHYHIP
dbVarPHYHIP
ClinVarPHYHIP
1000_GenomesPHYHIP 
Exome Variant ServerPHYHIP
ExAC (Exome Aggregation Consortium)PHYHIP (select the gene name)
Genetic variants : HAPMAP9796
Genomic Variants (DGV)PHYHIP [DGVbeta]
DECIPHER (Syndromes)8:22077216-22089851  ENSG00000168490
CONAN: Copy Number AnalysisPHYHIP 
Mutations
ICGC Data PortalPHYHIP 
TCGA Data PortalPHYHIP 
Broad Tumor PortalPHYHIP
OASIS PortalPHYHIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPHYHIP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPHYHIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PHYHIP
DgiDB (Drug Gene Interaction Database)PHYHIP
DoCM (Curated mutations)PHYHIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PHYHIP (select a term)
intoGenPHYHIP
Cancer3DPHYHIP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608511   
Orphanet
MedgenPHYHIP
Genetic Testing Registry PHYHIP
NextProtQ92561 [Medical]
TSGene9796
GENETestsPHYHIP
Huge Navigator PHYHIP [HugePedia]
snp3D : Map Gene to Disease9796
BioCentury BCIQPHYHIP
ClinGenPHYHIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9796
Chemical/Pharm GKB GenePA33281
Clinical trialPHYHIP
Miscellaneous
canSAR (ICR)PHYHIP (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePHYHIP
EVEXPHYHIP
GoPubMedPHYHIP
iHOPPHYHIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:38:35 CET 2017

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