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PHYHIPL (phytanoyl-CoA 2-hydroxylase interacting protein like)

Identity

Alias (NCBI)-
HGNC (Hugo) PHYHIPL
HGNC Alias symbKIAA1796
Em:AC025038.1
HGNC Previous namephytanoyl-CoA hydroxylase interacting protein-like
 phytanoyl-CoA 2-hydroxylase interacting protein-like
LocusID (NCBI) 84457
Atlas_Id 71899
Location 10q21.1  [Link to chromosome band 10q21]
Location_base_pair Starts at 59176643 and ends at 59247770 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BMS1 (10q11.21) / PHYHIPL (10q21.1)GBAS (7p11.2) / PHYHIPL (10q21.1)MRC2 (17q23.2) / PHYHIPL (10q21.1)
PHYHIPL (10q21.1) / CCND1 (11q13.3)PHYHIPL (10q21.1) / PHYHIPL (10q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PHYHIPL   29378
Cards
Entrez_Gene (NCBI)PHYHIPL    phytanoyl-CoA 2-hydroxylase interacting protein like
Aliases
GeneCards (Weizmann)PHYHIPL
Ensembl hg19 (Hinxton)ENSG00000165443 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165443 [Gene_View]  ENSG00000165443 [Sequence]  chr10:59176643-59247770 [Contig_View]  PHYHIPL [Vega]
ICGC DataPortalENSG00000165443
TCGA cBioPortalPHYHIPL
AceView (NCBI)PHYHIPL
Genatlas (Paris)PHYHIPL
SOURCE (Princeton)PHYHIPL
Genetics Home Reference (NIH)PHYHIPL
Genomic and cartography
GoldenPath hg38 (UCSC)PHYHIPL  -     chr10:59176643-59247770 +  10q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PHYHIPL  -     10q21.1   [Description]    (hg19-Feb_2009)
GoldenPathPHYHIPL - 10q21.1 [CytoView hg19]  PHYHIPL - 10q21.1 [CytoView hg38]
ImmunoBaseENSG00000165443
Genome Data Viewer NCBIPHYHIPL [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB058699 AK054956 AL365474 AL834339 AW299583
RefSeq transcript (Entrez)NM_001143774 NM_032439
Consensus coding sequences : CCDS (NCBI)PHYHIPL
Gene ExpressionPHYHIPL [ NCBI-GEO ]   PHYHIPL [ EBI - ARRAY_EXPRESS ]   PHYHIPL [ SEEK ]   PHYHIPL [ MEM ]
Gene Expression Viewer (FireBrowse)PHYHIPL [ Firebrowse - Broad ]
GenevisibleExpression of PHYHIPL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84457
GTEX Portal (Tissue expression)PHYHIPL
Human Protein AtlasENSG00000165443-PHYHIPL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96FC7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96FC7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96FC7
PhosPhoSitePlusQ96FC7
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)   
Domains : Interpro (EBI)FN3_dom    FN3_sf    Ig-like_fold    PHYHIP/PHYHIPL   
Domain families : Pfam (Sanger)fn3 (PF00041)   
Domain families : Pfam (NCBI)pfam00041   
Conserved Domain (NCBI)PHYHIPL
SuperfamilyQ96FC7
AlphaFold pdb e-kbQ96FC7   
Human Protein Atlas [tissue]ENSG00000165443-PHYHIPL [tissue]
HPRD15131
Protein Interaction databases
DIP (DOE-UCLA)Q96FC7
IntAct (EBI)Q96FC7
BioGRIDPHYHIPL
STRING (EMBL)PHYHIPL
ZODIACPHYHIPL
Ontologies - Pathways
QuickGOQ96FC7
Ontology : AmiGOprotein binding  cytoplasm  cytoplasm  
Ontology : EGO-EBIprotein binding  cytoplasm  cytoplasm  
NDEx NetworkPHYHIPL
Atlas of Cancer Signalling NetworkPHYHIPL
Wikipedia pathwaysPHYHIPL
Orthology - Evolution
OrthoDB84457
GeneTree (enSembl)ENSG00000165443
Phylogenetic Trees/Animal Genes : TreeFamPHYHIPL
Homologs : HomoloGenePHYHIPL
Homology/Alignments : Family Browser (UCSC)PHYHIPL
Gene fusions - Rearrangements
Fusion : QuiverPHYHIPL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPHYHIPL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PHYHIPL
dbVarPHYHIPL
ClinVarPHYHIPL
MonarchPHYHIPL
1000_GenomesPHYHIPL 
Exome Variant ServerPHYHIPL
GNOMAD BrowserENSG00000165443
Varsome BrowserPHYHIPL
ACMGPHYHIPL variants
VarityQ96FC7
Genomic Variants (DGV)PHYHIPL [DGVbeta]
DECIPHERPHYHIPL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPHYHIPL 
Mutations
ICGC Data PortalPHYHIPL 
TCGA Data PortalPHYHIPL 
Broad Tumor PortalPHYHIPL
OASIS PortalPHYHIPL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPHYHIPL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPHYHIPL
Mutations and Diseases : HGMDPHYHIPL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPHYHIPL
DgiDB (Drug Gene Interaction Database)PHYHIPL
DoCM (Curated mutations)PHYHIPL
CIViC (Clinical Interpretations of Variants in Cancer)PHYHIPL
Cancer3DPHYHIPL
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPHYHIPL
MedgenPHYHIPL
Genetic Testing Registry PHYHIPL
NextProtQ96FC7 [Medical]
GENETestsPHYHIPL
Target ValidationPHYHIPL
Huge Navigator PHYHIPL [HugePedia]
ClinGenPHYHIPL
Clinical trials, drugs, therapy
MyCancerGenomePHYHIPL
Protein Interactions : CTDPHYHIPL
Pharm GKB GenePA134906827
PharosQ96FC7
Clinical trialPHYHIPL
Miscellaneous
canSAR (ICR)PHYHIPL
HarmonizomePHYHIPL
DataMed IndexPHYHIPL
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPHYHIPL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:16:08 CEST 2021

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