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PI16 (peptidase inhibitor 16)

Identity

Other namesCRISP9
MSMBBP
PSPBP
HGNC (Hugo) PI16
LocusID (NCBI) 221476
Location 6p21.2
Location_base_pair Starts at 36916039 and ends at 36932613 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PI16   21245
Cards
Entrez_Gene (NCBI)PI16  221476  peptidase inhibitor 16
GeneCards (Weizmann)PI16
Ensembl (Hinxton)ENSG00000164530 [Gene_View]  chr6:36916039-36932613 [Contig_View]  PI16 [Vega]
ICGC DataPortalENSG00000164530
cBioPortalPI16
AceView (NCBI)PI16
Genatlas (Paris)PI16
WikiGenes221476
SOURCE (Princeton)NM_001199159 NM_153370
Genomic and cartography
GoldenPath (UCSC)PI16  -  6p21.2   chr6:36916039-36932613 +  6p21.2   [Description]    (hg19-Feb_2009)
EnsemblPI16 - 6p21.2 [CytoView]
Mapping of homologs : NCBIPI16 [Mapview]
Gene and transcription
Genbank (Entrez)AK075470 AK124589 AK302193 AK303928 AK312785
RefSeq transcript (Entrez)NM_001199159 NM_153370
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NT_007592 NW_001838980 NW_004929326
Consensus coding sequences : CCDS (NCBI)PI16
Cluster EST : UnigeneHs.25391 [ NCBI ]
CGAP (NCI)Hs.25391
Alternative Splicing : Fast-db (Paris)GSHG0025690
Alternative Splicing GalleryENSG00000164530
Gene ExpressionPI16 [ NCBI-GEO ]     PI16 [ SEEK ]   PI16 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXB8 (Uniprot)
NextProtQ6UXB8  [Medical]
With graphics : InterProQ6UXB8
Splice isoforms : SwissVarQ6UXB8 (Swissvar)
Domaine pattern : Prosite (Expaxy)CRISP_1 (PS01009)    CRISP_2 (PS01010)   
Domains : Interpro (EBI)Allrgn_V5/Tpx1 [organisation]   Allrgn_V5/Tpx1_CS [organisation]   CAP_domain [organisation]  
Related proteins : CluSTrQ6UXB8
Domain families : Pfam (Sanger)CAP (PF00188)   
Domain families : Pfam (NCBI)pfam00188   
Domain families : Smart (EMBL)SCP (SM00198)  
DMDM Disease mutations221476
Blocks (Seattle)Q6UXB8
Human Protein AtlasENSG00000164530 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ6UXB8
IPIIPI00301143   IPI00845506   IPI01015788   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXB8
IntAct (EBI)Q6UXB8
FunCoupENSG00000164530
BioGRIDPI16
InParanoidQ6UXB8
Interologous Interaction database Q6UXB8
IntegromeDBPI16
STRING (EMBL)PI16
Ontologies - Pathways
Ontology : AmiGOnegative regulation of peptidase activity  integral component of membrane  peptidase inhibitor activity  extracellular vesicular exosome  
Ontology : EGO-EBInegative regulation of peptidase activity  integral component of membrane  peptidase inhibitor activity  extracellular vesicular exosome  
Protein Interaction DatabasePI16
Wikipedia pathwaysPI16
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)PI16
snp3D : Map Gene to Disease221476
SNP (GeneSNP Utah)PI16
SNP : HGBasePI16
Genetic variants : HAPMAPPI16
Exome VariantPI16
1000_GenomesPI16 
ICGC programENSG00000164530 
Somatic Mutations in Cancer : COSMICPI16 
CONAN: Copy Number AnalysisPI16 
Mutations and Diseases : HGMDPI16
Genomic VariantsPI16  PI16 [DGVbeta]
dbVarPI16
ClinVarPI16
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM
MedgenPI16
GENETestsPI16
Disease Genetic AssociationPI16
Huge Navigator PI16 [HugePedia]  PI16 [HugeCancerGEM]
General knowledge
Homologs : HomoloGenePI16
Homology/Alignments : Family Browser (UCSC)PI16
Phylogenetic Trees/Animal Genes : TreeFamPI16
Chemical/Protein Interactions : CTD221476
Chemical/Pharm GKB GenePA134867616
Clinical trialPI16
Cancer Resource (Charite)ENSG00000164530
Other databases
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
CoreMinePI16
iHOPPI16
OncoSearchPI16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 30 14:09:43 CEST 2014

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