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PIANP (PILR alpha associated neural protein)

Identity

Alias_namesC12orf53
chromosome 12 open reading frame 53
Alias_symbol (synonym)DKFZp547D2210
PANP
Other aliasLEDA1
leda-1
HGNC (Hugo) PIANP
LocusID (NCBI) 196500
Atlas_Id 71905
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 6693791 and ends at 6700843 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIANP   25338
Cards
Entrez_Gene (NCBI)PIANP  196500  PILR alpha associated neural protein
AliasesC12orf53; LEDA1; PANP; leda-1
GeneCards (Weizmann)PIANP
Ensembl hg19 (Hinxton)ENSG00000139200 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000139200 [Gene_View]  chr12:6693791-6700843 [Contig_View]  PIANP [Vega]
ICGC DataPortalENSG00000139200
TCGA cBioPortalPIANP
AceView (NCBI)PIANP
Genatlas (Paris)PIANP
WikiGenes196500
SOURCE (Princeton)PIANP
Genetics Home Reference (NIH)PIANP
Genomic and cartography
GoldenPath hg38 (UCSC)PIANP  -     chr12:6693791-6700843 -  12p13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIANP  -     12p13.31   [Description]    (hg19-Feb_2009)
EnsemblPIANP - 12p13.31 [CytoView hg19]  PIANP - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIPIANP [Mapview hg19]  PIANP [Mapview hg38]
OMIM616065   
Gene and transcription
Genbank (Entrez)AA653479 AK056295 AK091596 AK091656 AK095854
RefSeq transcript (Entrez)NM_001244014 NM_001244015 NM_153685
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIANP
Cluster EST : UnigeneHs.740050 [ NCBI ]
CGAP (NCI)Hs.740050
Alternative Splicing GalleryENSG00000139200
Gene ExpressionPIANP [ NCBI-GEO ]   PIANP [ EBI - ARRAY_EXPRESS ]   PIANP [ SEEK ]   PIANP [ MEM ]
Gene Expression Viewer (FireBrowse)PIANP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196500
GTEX Portal (Tissue expression)PIANP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYJ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYJ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYJ0
Splice isoforms : SwissVarQ8IYJ0
PhosPhoSitePlusQ8IYJ0
Domains : Interpro (EBI)AJAP1_PANP_C   
Domain families : Pfam (Sanger)AJAP1_PANP_C (PF15298)   
Domain families : Pfam (NCBI)pfam15298   
Conserved Domain (NCBI)PIANP
DMDM Disease mutations196500
Blocks (Seattle)PIANP
SuperfamilyQ8IYJ0
Human Protein AtlasENSG00000139200
Peptide AtlasQ8IYJ0
HPRD13205
IPIIPI00217787   IPI00845269   IPI00903007   IPI01014920   IPI01012830   IPI01014127   IPI01011987   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYJ0
IntAct (EBI)Q8IYJ0
FunCoupENSG00000139200
BioGRIDPIANP
STRING (EMBL)PIANP
ZODIACPIANP
Ontologies - Pathways
QuickGOQ8IYJ0
Ontology : AmiGOadherens junction  integral component of membrane  basolateral plasma membrane  
Ontology : EGO-EBIadherens junction  integral component of membrane  basolateral plasma membrane  
NDEx NetworkPIANP
Atlas of Cancer Signalling NetworkPIANP
Wikipedia pathwaysPIANP
Orthology - Evolution
OrthoDB196500
GeneTree (enSembl)ENSG00000139200
Phylogenetic Trees/Animal Genes : TreeFamPIANP
HOVERGENQ8IYJ0
HOGENOMQ8IYJ0
Homologs : HomoloGenePIANP
Homology/Alignments : Family Browser (UCSC)PIANP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPIANP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PIANP
dbVarPIANP
ClinVarPIANP
1000_GenomesPIANP 
Exome Variant ServerPIANP
ExAC (Exome Aggregation Consortium)PIANP (select the gene name)
Genetic variants : HAPMAP196500
Genomic Variants (DGV)PIANP [DGVbeta]
DECIPHERPIANP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPIANP 
Mutations
ICGC Data PortalPIANP 
TCGA Data PortalPIANP 
Broad Tumor PortalPIANP
OASIS PortalPIANP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPIANP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PIANP
DgiDB (Drug Gene Interaction Database)PIANP
DoCM (Curated mutations)PIANP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PIANP (select a term)
intoGenPIANP
Cancer3DPIANP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616065   
Orphanet
MedgenPIANP
Genetic Testing Registry PIANP
NextProtQ8IYJ0 [Medical]
TSGene196500
GENETestsPIANP
Target ValidationPIANP
Huge Navigator PIANP [HugePedia]
snp3D : Map Gene to Disease196500
BioCentury BCIQPIANP
ClinGenPIANP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196500
Chemical/Pharm GKB GenePA143485382
Clinical trialPIANP
Miscellaneous
canSAR (ICR)PIANP (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIANP
EVEXPIANP
GoPubMedPIANP
iHOPPIANP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:36:19 CEST 2017

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