Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PICART1 (p53 inducible cancer associated RNA transcript 1)

Identity

Other alias-
HGNC (Hugo) PICART1
LocusID (NCBI) 284080
Atlas_Id 56778
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 50050349 and ends at 50055739 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PICART1   27576
Cards
Entrez_Gene (NCBI)PICART1  284080  p53 inducible cancer associated RNA transcript 1
Aliases
GeneCards (Weizmann)PICART1
Ensembl hg19 (Hinxton)ENSG00000246640 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246640 [Gene_View]  ENSG00000246640 [Sequence]  chr17:50050349-50055739 [Contig_View]  PICART1 [Vega]
ICGC DataPortalENSG00000246640
TCGA cBioPortalPICART1
AceView (NCBI)PICART1
Genatlas (Paris)PICART1
WikiGenes284080
SOURCE (Princeton)PICART1
Genetics Home Reference (NIH)PICART1
Genomic and cartography
GoldenPath hg38 (UCSC)PICART1  -     chr17:50050349-50055739 -  17q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PICART1  -     17q21.33   [Description]    (hg19-Feb_2009)
EnsemblPICART1 - 17q21.33 [CytoView hg19]  PICART1 - 17q21.33 [CytoView hg38]
Mapping of homologs : NCBIPICART1 [Mapview hg19]  PICART1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096761
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PICART1
Cluster EST : UnigeneHs.274864 [ NCBI ]
CGAP (NCI)Hs.274864
Alternative Splicing GalleryENSG00000246640
Gene ExpressionPICART1 [ NCBI-GEO ]   PICART1 [ EBI - ARRAY_EXPRESS ]   PICART1 [ SEEK ]   PICART1 [ MEM ]
Gene Expression Viewer (FireBrowse)PICART1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284080
GTEX Portal (Tissue expression)PICART1
Human Protein AtlasENSG00000246640-PICART1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PICART1
DMDM Disease mutations284080
Blocks (Seattle)PICART1
Human Protein Atlas [tissue]ENSG00000246640-PICART1 [tissue]
Protein Interaction databases
FunCoupENSG00000246640
BioGRIDPICART1
STRING (EMBL)PICART1
ZODIACPICART1
Ontologies - Pathways
Huge Navigator PICART1 [HugePedia]
snp3D : Map Gene to Disease284080
BioCentury BCIQPICART1
ClinGenPICART1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284080
Clinical trialPICART1
Miscellaneous
canSAR (ICR)PICART1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePICART1
EVEXPICART1
GoPubMedPICART1
iHOPPICART1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:29:54 CET 2018

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