PIGF (phosphatidylinositol glycan anchor biosynthesis class F)

2007-04-01  

Identity

HGNC
PIGF
LOCATION
2p21
LOCUSID
5281
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 5281
MIM: 600153
HGNC: 8962
Ensembl: ENSG00000151665

Variants:

dbSNP: 5281
ClinVar: 5281
TCGA: ENSG00000151665
COSMIC: PIGF

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000151665ENST00000281382Q07326
ENSG00000151665ENST00000281382Q6IB04
ENSG00000151665ENST00000306465Q07326
ENSG00000151665ENST00000412717F8WEN5
ENSG00000151665ENST00000420164H7C392
ENSG00000151665ENST00000474980E5RIN5

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Glycosylphosphatidylinositol (GPI)-anchor biosynthesisKEGGko00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesisKEGGhsa00563
Metabolic pathwaysKEGGhsa01100
GPI-anchor biosynthesis, core oligosaccharideKEGGhsa_M00065
GPI-anchor biosynthesis, core oligosaccharideKEGGM00065
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
Post-translational modification: synthesis of GPI-anchored proteinsREACTOMER-HSA-163125
Synthesis of glycosylphosphatidylinositol (GPI)REACTOMER-HSA-162710

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
204160772010Identification of type 2 diabetes-associated combination of SNPs using support vector machine.26
156321362005GPI7 is the second partner of PIG-F and involved in modification of glycosylphosphatidylinositol.15
249211692014Retinal reactive astrocytic tumor: gene expression profiling.3
250742862014New insights into the functions of PIGF, a protein involved in the ethanolamine phosphate transfer steps of glycosylphosphatidylinositol biosynthesis.2

Citation

Dessen P

PIGF (phosphatidylinositol glycan anchor biosynthesis class F)

Atlas Genet Cytogenet Oncol Haematol. 2007-04-01

Online version: http://atlasgeneticsoncology.org/gene/46661/pigf