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PIGH (phosphatidylinositol glycan anchor biosynthesis class H)

Identity

Alias_namesphosphatidylinositol glycan
Alias_symbol (synonym)GPI-H
Other alias
HGNC (Hugo) PIGH
LocusID (NCBI) 5283
Atlas_Id 46949
Location 14q24.1  [Link to chromosome band 14q24]
Location_base_pair Starts at 68056023 and ends at 68067017 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIGH   8964
Cards
Entrez_Gene (NCBI)PIGH  5283  phosphatidylinositol glycan anchor biosynthesis class H
AliasesGPI-H
GeneCards (Weizmann)PIGH
Ensembl hg19 (Hinxton)ENSG00000100564 [Gene_View]  chr14:68056023-68067017 [Contig_View]  PIGH [Vega]
Ensembl hg38 (Hinxton)ENSG00000100564 [Gene_View]  chr14:68056023-68067017 [Contig_View]  PIGH [Vega]
ICGC DataPortalENSG00000100564
TCGA cBioPortalPIGH
AceView (NCBI)PIGH
Genatlas (Paris)PIGH
WikiGenes5283
SOURCE (Princeton)PIGH
Genetics Home Reference (NIH)PIGH
Genomic and cartography
GoldenPath hg19 (UCSC)PIGH  -     chr14:68056023-68067017 -  14q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PIGH  -     14q24.1   [Description]    (hg38-Dec_2013)
EnsemblPIGH - 14q24.1 [CytoView hg19]  PIGH - 14q24.1 [CytoView hg38]
Mapping of homologs : NCBIPIGH [Mapview hg19]  PIGH [Mapview hg38]
OMIM600154   
Gene and transcription
Genbank (Entrez)AI633958 AK293584 AK314108 BC004100 BC071849
RefSeq transcript (Entrez)NM_004569
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)PIGH
Cluster EST : UnigeneHs.553497 [ NCBI ]
CGAP (NCI)Hs.553497
Alternative Splicing GalleryENSG00000100564
Gene ExpressionPIGH [ NCBI-GEO ]   PIGH [ EBI - ARRAY_EXPRESS ]   PIGH [ SEEK ]   PIGH [ MEM ]
Gene Expression Viewer (FireBrowse)PIGH [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5283
GTEX Portal (Tissue expression)PIGH
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14442   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14442  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14442
Splice isoforms : SwissVarQ14442
Catalytic activity : Enzyme2.4.1.198 [ Enzyme-Expasy ]   2.4.1.1982.4.1.198 [ IntEnz-EBI ]   2.4.1.198 [ BRENDA ]   2.4.1.198 [ KEGG ]   
PhosPhoSitePlusQ14442
Domains : Interpro (EBI)GPI-GlcNAc_Trfase_PIG-H_dom   
Domain families : Pfam (Sanger)PIG-H (PF10181)   
Domain families : Pfam (NCBI)pfam10181   
Conserved Domain (NCBI)PIGH
DMDM Disease mutations5283
Blocks (Seattle)PIGH
SuperfamilyQ14442
Human Protein AtlasENSG00000100564
Peptide AtlasQ14442
HPRD02540
IPIIPI00005263   
Protein Interaction databases
DIP (DOE-UCLA)Q14442
IntAct (EBI)Q14442
FunCoupENSG00000100564
BioGRIDPIGH
STRING (EMBL)PIGH
ZODIACPIGH
Ontologies - Pathways
QuickGOQ14442
Ontology : AmiGOglycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex  catalytic activity  endoplasmic reticulum  endoplasmic reticulum membrane  cellular protein modification process  GPI anchor biosynthetic process  preassembly of GPI anchor in ER membrane  phosphatidylinositol N-acetylglucosaminyltransferase activity  
Ontology : EGO-EBIglycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex  catalytic activity  endoplasmic reticulum  endoplasmic reticulum membrane  cellular protein modification process  GPI anchor biosynthetic process  preassembly of GPI anchor in ER membrane  phosphatidylinositol N-acetylglucosaminyltransferase activity  
Pathways : KEGGGlycosylphosphatidylinositol(GPI)-anchor biosynthesis   
NDEx NetworkPIGH
Atlas of Cancer Signalling NetworkPIGH
Wikipedia pathwaysPIGH
Orthology - Evolution
OrthoDB5283
GeneTree (enSembl)ENSG00000100564
Phylogenetic Trees/Animal Genes : TreeFamPIGH
HOVERGENQ14442
HOGENOMQ14442
Homologs : HomoloGenePIGH
Homology/Alignments : Family Browser (UCSC)PIGH
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPIGH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PIGH
dbVarPIGH
ClinVarPIGH
1000_GenomesPIGH 
Exome Variant ServerPIGH
ExAC (Exome Aggregation Consortium)PIGH (select the gene name)
Genetic variants : HAPMAP5283
Genomic Variants (DGV)PIGH [DGVbeta]
DECIPHER (Syndromes)14:68056023-68067017  ENSG00000100564
CONAN: Copy Number AnalysisPIGH 
Mutations
ICGC Data PortalPIGH 
TCGA Data PortalPIGH 
Broad Tumor PortalPIGH
OASIS PortalPIGH [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPIGH  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPIGH
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PIGH
DgiDB (Drug Gene Interaction Database)PIGH
DoCM (Curated mutations)PIGH (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PIGH (select a term)
intoGenPIGH
Cancer3DPIGH(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600154   
Orphanet
MedgenPIGH
Genetic Testing Registry PIGH
NextProtQ14442 [Medical]
TSGene5283
GENETestsPIGH
Huge Navigator PIGH [HugePedia]
snp3D : Map Gene to Disease5283
BioCentury BCIQPIGH
ClinGenPIGH
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD5283
Chemical/Pharm GKB GenePA33295
Clinical trialPIGH
Miscellaneous
canSAR (ICR)PIGH (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIGH
EVEXPIGH
GoPubMedPIGH
iHOPPIGH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:14:20 CEST 2017

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