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PIGH (phosphatidylinositol glycan anchor biosynthesis, class H)

Identity

Other namesGPI-H
HGNC (Hugo) PIGH
LocusID (NCBI) 5283
Location 14q24.1
Location_base_pair Starts at 68056023 and ends at 68067017 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PIGH   8964
Entrez_Gene (NCBI)PIGH  5283  phosphatidylinositol glycan anchor biosynthesis, class H
Cards
GeneCards (Weizmann)PIGH
Ensembl (Hinxton)ENSG00000100564 [Gene_View]  chr14:68056023-68067017 [Contig_View]  PIGH [Vega]
AceView (NCBI)PIGH
Genatlas (Paris)PIGH
SOURCE (Stanford)NM_004569
Genomic and cartography
GoldenPath (UCSC)PIGH  -  14q24.1   chr14:68056023-68067017 -  14q24.1   [Description]    (hg19-Feb_2009)
EnsemblPIGH - 14q24.1 [CytoView]
Mapping of homologs : NCBIPIGH [Mapview]
OMIM600154   
Gene and transcription
Genbank (Entrez)AI633958 AK314108 BC004100 BC071849 BP244435
RefSeq transcript (SRS)NM_004569
RefSeq transcript (Entrez)NM_004569
RefSeq genomic (SRS)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838112 NW_004078079
RefSeq genomic (Entrez)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838112 NW_004078079
Consensus coding sequences : CCDS (NCBI)PIGH
Cluster EST : UnigeneHs.553497 [ SRS ] Hs.553497 [ NCBI ]
CGAP (NCI)Hs.553497
Alternative Splicing : Fast-db (Paris)GSHG0009437
Alternative Splicing GalleryENSG00000100564
Gene ExpressionPIGH [ NCBI-GEO ]   PIGH [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14442 (SRS) Q14442 (Uniprot)
NextProtQ14442
With graphics : InterProQ14442
Splice isoforms : SwissVarQ14442(Swissvar)
Domains : Interpro (SRS)GPI-GlcNAc_Trfase_PIG-H_dom   
Domains : Interpro (EBI)GPI-GlcNAc_Trfase_PIG-H_dom   
Related proteins : CluSTrQ14442
Domain families : Pfam (SRS)PIG-H (PF10181)   
Domain families : Pfam (Sanger)PIG-H (PF10181)   
Domain families : Pfam (NCBI)pfam10181   
DMDM5283
Blocks (Seattle)Q14442
Human Protein AtlasENSG00000100564
HPRD02540
IPIIPI00005263   
Protein Interaction databases
DIP (DOE-UCLA)Q14442
IntAct (EBI)Q14442
FunCoupENSG00000100564
REACTOMEPIGH
Protein Interaction Database5283
BioGRIDPIGH
InParanoidQ14442
Interologous Interaction database Q14442
IntegromeDBPIGH
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)PIGH
SNP (GeneSNP Utah)PIGH
SNP : HGBasePIGH
Genetic variants : HAPMAPPIGH
Somatic Mutations in Cancer : COSMICPIGH 
CONAN: Copy Number AnalysisPIGH 
Mutations and Diseases : HGMDPIGH
OMIM600154   
GENETests600154   
Disease Genetic AssociationPIGH
Huge Navigator PIGH [HugePedia]  PIGH [HugeCancerGEM]
Genomic VariantsPIGH  PIGH [DGVbeta]
snp3D : Map Gene to Disease5283
General knowledge
Homologs : HomoloGenePIGH
Homology/Alignments : Family Browser (UCSC)PIGH
Phylogenetic Trees/Animal Genes : TreeFamPIGH
Catalytic activity : Enzyme2.4.1.198 [ Enzyme-Expasy ]   2.4.1.198 [ Enzyme-SRS ]   2.4.1.198 [ IntEnz-EBI ]   2.4.1.198 [ BRENDA ]   2.4.1.198 [ KEGG ]   
Chemical/Protein Interactions : CTD5283
Chemical/Pharm GKB GenePA33295
Clinical trialPIGH
Cancer Resource (Charite)ENSG00000100564
Ontology : AmiGOglycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex  catalytic activity  nucleus  nucleolus  cytoplasm  mitochondrion  endoplasmic reticulum  endoplasmic reticulum membrane  cellular protein modification process  C-terminal protein lipidation  GPI anchor biosynthetic process  preassembly of GPI anchor in ER membrane  phosphatidylinositol N-acetylglucosaminyltransferase activity  post-translational protein modification  cellular protein metabolic process  
Ontology : EGO-EBIglycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex  catalytic activity  nucleus  nucleolus  cytoplasm  mitochondrion  endoplasmic reticulum  endoplasmic reticulum membrane  cellular protein modification process  C-terminal protein lipidation  GPI anchor biosynthetic process  preassembly of GPI anchor in ER membrane  phosphatidylinositol N-acetylglucosaminyltransferase activity  post-translational protein modification  cellular protein metabolic process  
Pathways : KEGGGlycosylphosphatidylinositol(GPI)-anchor biosynthesisGlycan structures - biosynthesis 2
Other databases
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
PubGenePIGH
iHOPPIGH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:24:39 CEST 2013
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