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PIGY (phosphatidylinositol glycan anchor biosynthesis class Y)

Identity

Alias_namesphosphatidylinositol glycan, class Y
Alias_symbol (synonym)MGC14156
Other aliasHPMRS6
PIG-Y
HGNC (Hugo) PIGY
LocusID (NCBI) 84992
Atlas_Id 71911
Location 4q22.1  [Link to chromosome band 4q22]
Location_base_pair Starts at 88520978 and ends at 88523801 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PIGY (4q22.1) / JUN (1p32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIGY   28213
Cards
Entrez_Gene (NCBI)PIGY  84992  phosphatidylinositol glycan anchor biosynthesis class Y
AliasesHPMRS6; PIG-Y
GeneCards (Weizmann)PIGY
Ensembl hg19 (Hinxton)ENSG00000255072 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255072 [Gene_View]  chr4:88520978-88523801 [Contig_View]  PIGY [Vega]
ICGC DataPortalENSG00000255072
TCGA cBioPortalPIGY
AceView (NCBI)PIGY
Genatlas (Paris)PIGY
WikiGenes84992
SOURCE (Princeton)PIGY
Genetics Home Reference (NIH)PIGY
Genomic and cartography
GoldenPath hg38 (UCSC)PIGY  -     chr4:88520978-88523801 -  4q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIGY  -     4q22.1   [Description]    (hg19-Feb_2009)
EnsemblPIGY - 4q22.1 [CytoView hg19]  PIGY - 4q22.1 [CytoView hg38]
Mapping of homologs : NCBIPIGY [Mapview hg19]  PIGY [Mapview hg38]
OMIM610662   616809   
Gene and transcription
Genbank (Entrez)AB206972 BC007876 BI548853 DB519150
RefSeq transcript (Entrez)NM_001042616
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIGY
Cluster EST : UnigeneHs.743393 [ NCBI ]
CGAP (NCI)Hs.743393
Alternative Splicing GalleryENSG00000255072
Gene ExpressionPIGY [ NCBI-GEO ]   PIGY [ EBI - ARRAY_EXPRESS ]   PIGY [ SEEK ]   PIGY [ MEM ]
Gene Expression Viewer (FireBrowse)PIGY [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84992
GTEX Portal (Tissue expression)PIGY
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3MUY2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3MUY2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3MUY2
Splice isoforms : SwissVarQ3MUY2
PhosPhoSitePlusQ3MUY2
Domains : Interpro (EBI)PIG-Y    PIGY_chordates   
Domain families : Pfam (Sanger)PIG-Y (PF15159)   
Domain families : Pfam (NCBI)pfam15159   
Conserved Domain (NCBI)PIGY
DMDM Disease mutations84992
Blocks (Seattle)PIGY
SuperfamilyQ3MUY2
Human Protein AtlasENSG00000255072
Peptide AtlasQ3MUY2
HPRD17492
IPIIPI00654853   IPI00063244   
Protein Interaction databases
DIP (DOE-UCLA)Q3MUY2
IntAct (EBI)Q3MUY2
FunCoupENSG00000255072
BioGRIDPIGY
STRING (EMBL)PIGY
ZODIACPIGY
Ontologies - Pathways
QuickGOQ3MUY2
Ontology : AmiGOglycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex  endoplasmic reticulum membrane  plasma membrane  GPI anchor biosynthetic process  GPI anchor biosynthetic process  integral component of membrane  
Ontology : EGO-EBIglycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex  endoplasmic reticulum membrane  plasma membrane  GPI anchor biosynthetic process  GPI anchor biosynthetic process  integral component of membrane  
Pathways : KEGGGlycosylphosphatidylinositol(GPI)-anchor biosynthesis   
NDEx NetworkPIGY
Atlas of Cancer Signalling NetworkPIGY
Wikipedia pathwaysPIGY
Orthology - Evolution
OrthoDB84992
GeneTree (enSembl)ENSG00000255072
Phylogenetic Trees/Animal Genes : TreeFamPIGY
HOVERGENQ3MUY2
HOGENOMQ3MUY2
Homologs : HomoloGenePIGY
Homology/Alignments : Family Browser (UCSC)PIGY
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPIGY [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PIGY
dbVarPIGY
ClinVarPIGY
1000_GenomesPIGY 
Exome Variant ServerPIGY
ExAC (Exome Aggregation Consortium)PIGY (select the gene name)
Genetic variants : HAPMAP84992
Genomic Variants (DGV)PIGY [DGVbeta]
DECIPHERPIGY [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPIGY 
Mutations
ICGC Data PortalPIGY 
TCGA Data PortalPIGY 
Broad Tumor PortalPIGY
OASIS PortalPIGY [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPIGY  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPIGY
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch PIGY
DgiDB (Drug Gene Interaction Database)PIGY
DoCM (Curated mutations)PIGY (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PIGY (select a term)
intoGenPIGY
Cancer3DPIGY(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610662    616809   
Orphanet19518   
MedgenPIGY
Genetic Testing Registry PIGY
NextProtQ3MUY2 [Medical]
TSGene84992
GENETestsPIGY
Target ValidationPIGY
Huge Navigator PIGY [HugePedia]
snp3D : Map Gene to Disease84992
BioCentury BCIQPIGY
ClinGenPIGY
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84992
Chemical/Pharm GKB GenePA143485576
Clinical trialPIGY
Miscellaneous
canSAR (ICR)PIGY (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIGY
EVEXPIGY
GoPubMedPIGY
iHOPPIGY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:34:32 CEST 2017

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