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PIH1D2 (PIH1 domain containing 2)

Identity

Other alias-
HGNC (Hugo) PIH1D2
LocusID (NCBI) 120379
Atlas_Id 71914
Location 11q23.1  [Link to chromosome band 11q23]
Location_base_pair Starts at 112064010 and ends at 112074171 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIH1D2   25210
Cards
Entrez_Gene (NCBI)PIH1D2  120379  PIH1 domain containing 2
Aliases
GeneCards (Weizmann)PIH1D2
Ensembl hg19 (Hinxton)ENSG00000150773 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150773 [Gene_View]  chr11:112064010-112074171 [Contig_View]  PIH1D2 [Vega]
ICGC DataPortalENSG00000150773
TCGA cBioPortalPIH1D2
AceView (NCBI)PIH1D2
Genatlas (Paris)PIH1D2
WikiGenes120379
SOURCE (Princeton)PIH1D2
Genetics Home Reference (NIH)PIH1D2
Genomic and cartography
GoldenPath hg38 (UCSC)PIH1D2  -     chr11:112064010-112074171 -  11q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIH1D2  -     11q23.1   [Description]    (hg19-Feb_2009)
EnsemblPIH1D2 - 11q23.1 [CytoView hg19]  PIH1D2 - 11q23.1 [CytoView hg38]
Mapping of homologs : NCBIPIH1D2 [Mapview hg19]  PIH1D2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI339257 AK300496 BC019238 CA312666 CB159963
RefSeq transcript (Entrez)NM_001082619 NM_138789
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIH1D2
Cluster EST : UnigeneHs.420662 [ NCBI ]
CGAP (NCI)Hs.420662
Alternative Splicing GalleryENSG00000150773
Gene ExpressionPIH1D2 [ NCBI-GEO ]   PIH1D2 [ EBI - ARRAY_EXPRESS ]   PIH1D2 [ SEEK ]   PIH1D2 [ MEM ]
Gene Expression Viewer (FireBrowse)PIH1D2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)120379
GTEX Portal (Tissue expression)PIH1D2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWB5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWB5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWB5
Splice isoforms : SwissVarQ8WWB5
PhosPhoSitePlusQ8WWB5
Domains : Interpro (EBI)PIH1   
Domain families : Pfam (Sanger)PIH1 (PF08190)   
Domain families : Pfam (NCBI)pfam08190   
Conserved Domain (NCBI)PIH1D2
DMDM Disease mutations120379
Blocks (Seattle)PIH1D2
SuperfamilyQ8WWB5
Human Protein AtlasENSG00000150773
Peptide AtlasQ8WWB5
HPRD14021
IPIIPI00103298   IPI00843915   IPI00977959   IPI00976209   IPI00978026   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWB5
IntAct (EBI)Q8WWB5
FunCoupENSG00000150773
BioGRIDPIH1D2
STRING (EMBL)PIH1D2
ZODIACPIH1D2
Ontologies - Pathways
QuickGOQ8WWB5
Ontology : AmiGOprotein binding  Ral GTPase binding  
Ontology : EGO-EBIprotein binding  Ral GTPase binding  
NDEx NetworkPIH1D2
Atlas of Cancer Signalling NetworkPIH1D2
Wikipedia pathwaysPIH1D2
Orthology - Evolution
OrthoDB120379
GeneTree (enSembl)ENSG00000150773
Phylogenetic Trees/Animal Genes : TreeFamPIH1D2
HOVERGENQ8WWB5
HOGENOMQ8WWB5
Homologs : HomoloGenePIH1D2
Homology/Alignments : Family Browser (UCSC)PIH1D2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPIH1D2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PIH1D2
dbVarPIH1D2
ClinVarPIH1D2
1000_GenomesPIH1D2 
Exome Variant ServerPIH1D2
ExAC (Exome Aggregation Consortium)PIH1D2 (select the gene name)
Genetic variants : HAPMAP120379
Genomic Variants (DGV)PIH1D2 [DGVbeta]
DECIPHERPIH1D2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPIH1D2 
Mutations
ICGC Data PortalPIH1D2 
TCGA Data PortalPIH1D2 
Broad Tumor PortalPIH1D2
OASIS PortalPIH1D2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPIH1D2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPIH1D2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PIH1D2
DgiDB (Drug Gene Interaction Database)PIH1D2
DoCM (Curated mutations)PIH1D2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PIH1D2 (select a term)
intoGenPIH1D2
Cancer3DPIH1D2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPIH1D2
Genetic Testing Registry PIH1D2
NextProtQ8WWB5 [Medical]
TSGene120379
GENETestsPIH1D2
Target ValidationPIH1D2
Huge Navigator PIH1D2 [HugePedia]
snp3D : Map Gene to Disease120379
BioCentury BCIQPIH1D2
ClinGenPIH1D2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD120379
Chemical/Pharm GKB GenePA162399536
Clinical trialPIH1D2
Miscellaneous
canSAR (ICR)PIH1D2 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIH1D2
EVEXPIH1D2
GoPubMedPIH1D2
iHOPPIH1D2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:36:21 CEST 2017

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