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PIH1D3 (PIH1 domain containing 3)

Identity

Alias_namesCXorf41
chromosome X open reading frame 41
Alias_symbol (synonym)MGC35261
NYSAR97
Other aliasCILD36
HGNC (Hugo) PIH1D3
LocusID (NCBI) 139212
Atlas_Id 71915
Location Xq22.3  [Link to chromosome band Xq22]
Location_base_pair Starts at 107206632 and ends at 107244243 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIH1D3   28570
Cards
Entrez_Gene (NCBI)PIH1D3  139212  PIH1 domain containing 3
AliasesCILD36; CXorf41; NYSAR97
GeneCards (Weizmann)PIH1D3
Ensembl hg19 (Hinxton)ENSG00000080572 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000080572 [Gene_View]  chrX:107206632-107244243 [Contig_View]  PIH1D3 [Vega]
ICGC DataPortalENSG00000080572
TCGA cBioPortalPIH1D3
AceView (NCBI)PIH1D3
Genatlas (Paris)PIH1D3
WikiGenes139212
SOURCE (Princeton)PIH1D3
Genetics Home Reference (NIH)PIH1D3
Genomic and cartography
GoldenPath hg38 (UCSC)PIH1D3  -     chrX:107206632-107244243 +  Xq22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIH1D3  -     Xq22.3   [Description]    (hg19-Feb_2009)
EnsemblPIH1D3 - Xq22.3 [CytoView hg19]  PIH1D3 - Xq22.3 [CytoView hg38]
Mapping of homologs : NCBIPIH1D3 [Mapview hg19]  PIH1D3 [Mapview hg38]
OMIM300933   300991   
Gene and transcription
Genbank (Entrez)AI147427 AY211928 BC033510
RefSeq transcript (Entrez)NM_001169154 NM_173494
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIH1D3
Cluster EST : UnigeneHs.128836 [ NCBI ]
CGAP (NCI)Hs.128836
Alternative Splicing GalleryENSG00000080572
Gene ExpressionPIH1D3 [ NCBI-GEO ]   PIH1D3 [ EBI - ARRAY_EXPRESS ]   PIH1D3 [ SEEK ]   PIH1D3 [ MEM ]
Gene Expression Viewer (FireBrowse)PIH1D3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139212
GTEX Portal (Tissue expression)PIH1D3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NQM4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NQM4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NQM4
Splice isoforms : SwissVarQ9NQM4
PhosPhoSitePlusQ9NQM4
Domains : Interpro (EBI)PIH1D3   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PIH1D3
DMDM Disease mutations139212
Blocks (Seattle)PIH1D3
SuperfamilyQ9NQM4
Human Protein AtlasENSG00000080572
Peptide AtlasQ9NQM4
HPRD06650
IPIIPI00027634   
Protein Interaction databases
DIP (DOE-UCLA)Q9NQM4
IntAct (EBI)Q9NQM4
FunCoupENSG00000080572
BioGRIDPIH1D3
STRING (EMBL)PIH1D3
ZODIACPIH1D3
Ontologies - Pathways
QuickGOQ9NQM4
Ontology : AmiGOcilium movement  protein binding  cytoplasm  flagellated sperm motility  flagellated sperm motility  chaperone binding  axonemal dynein complex assembly  axonemal dynein complex assembly  
Ontology : EGO-EBIcilium movement  protein binding  cytoplasm  flagellated sperm motility  flagellated sperm motility  chaperone binding  axonemal dynein complex assembly  axonemal dynein complex assembly  
NDEx NetworkPIH1D3
Atlas of Cancer Signalling NetworkPIH1D3
Wikipedia pathwaysPIH1D3
Orthology - Evolution
OrthoDB139212
GeneTree (enSembl)ENSG00000080572
Phylogenetic Trees/Animal Genes : TreeFamPIH1D3
HOVERGENQ9NQM4
HOGENOMQ9NQM4
Homologs : HomoloGenePIH1D3
Homology/Alignments : Family Browser (UCSC)PIH1D3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPIH1D3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PIH1D3
dbVarPIH1D3
ClinVarPIH1D3
1000_GenomesPIH1D3 
Exome Variant ServerPIH1D3
ExAC (Exome Aggregation Consortium)PIH1D3 (select the gene name)
Genetic variants : HAPMAP139212
Genomic Variants (DGV)PIH1D3 [DGVbeta]
DECIPHERPIH1D3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPIH1D3 
Mutations
ICGC Data PortalPIH1D3 
TCGA Data PortalPIH1D3 
Broad Tumor PortalPIH1D3
OASIS PortalPIH1D3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPIH1D3
BioMutasearch PIH1D3
DgiDB (Drug Gene Interaction Database)PIH1D3
DoCM (Curated mutations)PIH1D3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PIH1D3 (select a term)
intoGenPIH1D3
Cancer3DPIH1D3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300933    300991   
Orphanet
MedgenPIH1D3
Genetic Testing Registry PIH1D3
NextProtQ9NQM4 [Medical]
TSGene139212
GENETestsPIH1D3
Target ValidationPIH1D3
Huge Navigator PIH1D3 [HugePedia]
snp3D : Map Gene to Disease139212
BioCentury BCIQPIH1D3
ClinGenPIH1D3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139212
Chemical/Pharm GKB GenePA134882142
Clinical trialPIH1D3
Miscellaneous
canSAR (ICR)PIH1D3 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIH1D3
EVEXPIH1D3
GoPubMedPIH1D3
iHOPPIH1D3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:36:22 CEST 2017

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