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PIK3CD-AS2 (PIK3CD antisense RNA 2)

Identity

Other alias-
HGNC (Hugo) PIK3CD-AS2
LocusID (NCBI) 101929074
Atlas_Id 76767
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 9672426 and ends at 9687574 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIK3CD-AS2   51334
Cards
Entrez_Gene (NCBI)PIK3CD-AS2  101929074  PIK3CD antisense RNA 2
Aliases
GeneCards (Weizmann)PIK3CD-AS2
Ensembl hg19 (Hinxton)ENSG00000231789 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231789 [Gene_View]  chr1:9672426-9687574 [Contig_View]  PIK3CD-AS2 [Vega]
ICGC DataPortalENSG00000231789
TCGA cBioPortalPIK3CD-AS2
AceView (NCBI)PIK3CD-AS2
Genatlas (Paris)PIK3CD-AS2
WikiGenes101929074
SOURCE (Princeton)PIK3CD-AS2
Genetics Home Reference (NIH)PIK3CD-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)PIK3CD-AS2  -     chr1:9672426-9687574 -  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIK3CD-AS2  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblPIK3CD-AS2 - 1p36.22 [CytoView hg19]  PIK3CD-AS2 - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIPIK3CD-AS2 [Mapview hg19]  PIK3CD-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA341665 AL523099 BC038541 BI763597 BP394863
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIK3CD-AS2
Cluster EST : UnigeneHs.661762 [ NCBI ]
CGAP (NCI)Hs.661762
Alternative Splicing GalleryENSG00000231789
Gene ExpressionPIK3CD-AS2 [ NCBI-GEO ]   PIK3CD-AS2 [ EBI - ARRAY_EXPRESS ]   PIK3CD-AS2 [ SEEK ]   PIK3CD-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)PIK3CD-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929074
GTEX Portal (Tissue expression)PIK3CD-AS2
Human Protein AtlasENSG00000231789-PIK3CD-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PIK3CD-AS2
DMDM Disease mutations101929074
Blocks (Seattle)PIK3CD-AS2
Human Protein Atlas [tissue]ENSG00000231789-PIK3CD-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000231789
BioGRIDPIK3CD-AS2
STRING (EMBL)PIK3CD-AS2
ZODIACPIK3CD-AS2
Ontologies - Pathways
Huge Navigator PIK3CD-AS2 [HugePedia]
snp3D : Map Gene to Disease101929074
BioCentury BCIQPIK3CD-AS2
ClinGenPIK3CD-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929074
Clinical trialPIK3CD-AS2
Miscellaneous
canSAR (ICR)PIK3CD-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIK3CD-AS2
EVEXPIK3CD-AS2
GoPubMedPIK3CD-AS2
iHOPPIK3CD-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:07:09 CET 2017

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