Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PIK3IP1-AS1 (PIK3IP1 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) PIK3IP1-AS1
LocusID (NCBI) 101929760
Atlas_Id 71918
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 31335349 and ends at 31338021 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIK3IP1-AS1   41072
Cards
Entrez_Gene (NCBI)PIK3IP1-AS1  101929760  PIK3IP1 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)PIK3IP1-AS1
Ensembl hg19 (Hinxton)ENSG00000228839 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228839 [Gene_View]  chr22:31335349-31338021 [Contig_View]  PIK3IP1-AS1 [Vega]
ICGC DataPortalENSG00000228839
TCGA cBioPortalPIK3IP1-AS1
AceView (NCBI)PIK3IP1-AS1
Genatlas (Paris)PIK3IP1-AS1
WikiGenes101929760
SOURCE (Princeton)PIK3IP1-AS1
Genetics Home Reference (NIH)PIK3IP1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PIK3IP1-AS1  -     chr22:31335349-31338021 +  22q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIK3IP1-AS1  -     22q12.2   [Description]    (hg19-Feb_2009)
EnsemblPIK3IP1-AS1 - 22q12.2 [CytoView hg19]  PIK3IP1-AS1 - 22q12.2 [CytoView hg38]
Mapping of homologs : NCBIPIK3IP1-AS1 [Mapview hg19]  PIK3IP1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA610085 AW086071
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIK3IP1-AS1
Cluster EST : UnigeneHs.661718 [ NCBI ]
CGAP (NCI)Hs.661718
Alternative Splicing GalleryENSG00000228839
Gene ExpressionPIK3IP1-AS1 [ NCBI-GEO ]   PIK3IP1-AS1 [ EBI - ARRAY_EXPRESS ]   PIK3IP1-AS1 [ SEEK ]   PIK3IP1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PIK3IP1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929760
GTEX Portal (Tissue expression)PIK3IP1-AS1
Human Protein AtlasENSG00000228839-PIK3IP1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PIK3IP1-AS1
DMDM Disease mutations101929760
Blocks (Seattle)PIK3IP1-AS1
Human Protein Atlas [tissue]ENSG00000228839-PIK3IP1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000228839
BioGRIDPIK3IP1-AS1
STRING (EMBL)PIK3IP1-AS1
ZODIACPIK3IP1-AS1
Ontologies - Pathways
Huge Navigator PIK3IP1-AS1 [HugePedia]
snp3D : Map Gene to Disease101929760
BioCentury BCIQPIK3IP1-AS1
ClinGenPIK3IP1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929760
Clinical trialPIK3IP1-AS1
Miscellaneous
canSAR (ICR)PIK3IP1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIK3IP1-AS1
EVEXPIK3IP1-AS1
GoPubMedPIK3IP1-AS1
iHOPPIK3IP1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:09 CET 2017

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