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PIN1P1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1)

Identity

Alias_namesPIN1L
protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1-like
peptidylprolyl cis/trans isomerase, NIMA-interacting 1-like (pseudogene)
Other alias
HGNC (Hugo) PIN1P1
LocusID (NCBI) 5301
Atlas_Id 41719
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 69919322 and ends at 69920317 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIN1P1   8989
Cards
Entrez_Gene (NCBI)PIN1P1  5301  peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1
AliasesPIN1L
GeneCards (Weizmann)PIN1P1
Ensembl hg19 (Hinxton)ENSG00000229359 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229359 [Gene_View]  chr1:69919322-69920317 [Contig_View]  PIN1P1 [Vega]
ICGC DataPortalENSG00000229359
TCGA cBioPortalPIN1P1
AceView (NCBI)PIN1P1
Genatlas (Paris)PIN1P1
WikiGenes5301
SOURCE (Princeton)PIN1P1
Genetics Home Reference (NIH)PIN1P1
Genomic and cartography
GoldenPath hg38 (UCSC)PIN1P1  -     chr1:69919322-69920317 +  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIN1P1  -     1p31.1   [Description]    (hg19-Feb_2009)
EnsemblPIN1P1 - 1p31.1 [CytoView hg19]  PIN1P1 - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBIPIN1P1 [Mapview hg19]  PIN1P1 [Mapview hg38]
OMIM602051   
Gene and transcription
Genbank (Entrez)AK314840 U82382
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIN1P1
Cluster EST : UnigeneHs.654711 [ NCBI ]
CGAP (NCI)Hs.654711
Alternative Splicing GalleryENSG00000229359
Gene ExpressionPIN1P1 [ NCBI-GEO ]   PIN1P1 [ EBI - ARRAY_EXPRESS ]   PIN1P1 [ SEEK ]   PIN1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)PIN1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5301
GTEX Portal (Tissue expression)PIN1P1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15428   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15428  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15428
Splice isoforms : SwissVarO15428
PhosPhoSitePlusO15428
Domaine pattern : Prosite (Expaxy)WW_DOMAIN_1 (PS01159)    WW_DOMAIN_2 (PS50020)   
Domains : Interpro (EBI)WW_dom   
Domain families : Pfam (Sanger)WW (PF00397)   
Domain families : Pfam (NCBI)pfam00397   
Domain families : Smart (EMBL)WW (SM00456)  
Conserved Domain (NCBI)PIN1P1
DMDM Disease mutations5301
Blocks (Seattle)PIN1P1
SuperfamilyO15428
Human Protein AtlasENSG00000229359
Peptide AtlasO15428
HPRD03630
IPIIPI00006667   
Protein Interaction databases
DIP (DOE-UCLA)O15428
IntAct (EBI)O15428
FunCoupENSG00000229359
BioGRIDPIN1P1
STRING (EMBL)PIN1P1
ZODIACPIN1P1
Ontologies - Pathways
QuickGOO15428
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPIN1P1
Atlas of Cancer Signalling NetworkPIN1P1
Wikipedia pathwaysPIN1P1
Orthology - Evolution
OrthoDB5301
GeneTree (enSembl)ENSG00000229359
Phylogenetic Trees/Animal Genes : TreeFamPIN1P1
HOVERGENO15428
HOGENOMO15428
Homologs : HomoloGenePIN1P1
Homology/Alignments : Family Browser (UCSC)PIN1P1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPIN1P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PIN1P1
dbVarPIN1P1
ClinVarPIN1P1
1000_GenomesPIN1P1 
Exome Variant ServerPIN1P1
ExAC (Exome Aggregation Consortium)PIN1P1 (select the gene name)
Genetic variants : HAPMAP5301
Genomic Variants (DGV)PIN1P1 [DGVbeta]
DECIPHERPIN1P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPIN1P1 
Mutations
ICGC Data PortalPIN1P1 
TCGA Data PortalPIN1P1 
Broad Tumor PortalPIN1P1
OASIS PortalPIN1P1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPIN1P1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PIN1P1
DgiDB (Drug Gene Interaction Database)PIN1P1
DoCM (Curated mutations)PIN1P1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PIN1P1 (select a term)
intoGenPIN1P1
Cancer3DPIN1P1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602051   
Orphanet
MedgenPIN1P1
Genetic Testing Registry PIN1P1
NextProtO15428 [Medical]
TSGene5301
GENETestsPIN1P1
Target ValidationPIN1P1
Huge Navigator PIN1P1 [HugePedia]
snp3D : Map Gene to Disease5301
BioCentury BCIQPIN1P1
ClinGenPIN1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD5301
Chemical/Pharm GKB GenePA33321
Clinical trialPIN1P1
Miscellaneous
canSAR (ICR)PIN1P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIN1P1
EVEXPIN1P1
GoPubMedPIN1P1
iHOPPIN1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:49:32 CEST 2017

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