Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PINK1-AS (PINK1 antisense RNA)

Identity

Alias_namesPINK1-AS1
PINK1 antisense RNA 1 (non-protein coding)
PINK1 antisense RNA (non-protein coding)
Alias_symbol (synonym)FLJ00387
PINK1AS
naPINK1
Other aliasNAPINK1
HGNC (Hugo) PINK1-AS
LocusID (NCBI) 100861548
Atlas_Id 71924
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 20969150 and ends at 20978686 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PINK1-AS   38872
Cards
Entrez_Gene (NCBI)PINK1-AS  100861548  PINK1 antisense RNA
AliasesNAPINK1; PINK1-AS1; PINK1AS
GeneCards (Weizmann)PINK1-AS
Ensembl hg19 (Hinxton)ENSG00000117242 [Gene_View]  chr1:20969150-20978686 [Contig_View]  PINK1-AS [Vega]
Ensembl hg38 (Hinxton)ENSG00000117242 [Gene_View]  chr1:20969150-20978686 [Contig_View]  PINK1-AS [Vega]
ICGC DataPortalENSG00000117242
TCGA cBioPortalPINK1-AS
AceView (NCBI)PINK1-AS
Genatlas (Paris)PINK1-AS
WikiGenes100861548
SOURCE (Princeton)PINK1-AS
Genetics Home Reference (NIH)PINK1-AS
Genomic and cartography
GoldenPath hg19 (UCSC)PINK1-AS  -     chr1:20969150-20978686 -  1p36.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PINK1-AS  -     1p36.12   [Description]    (hg38-Dec_2013)
EnsemblPINK1-AS - 1p36.12 [CytoView hg19]  PINK1-AS - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBIPINK1-AS [Mapview hg19]  PINK1-AS [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090466 AK172749 AY358957 HG491756
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_008164 NT_032977 NW_004929289
Consensus coding sequences : CCDS (NCBI)PINK1-AS
Cluster EST : UnigeneHs.710259 [ NCBI ]
CGAP (NCI)Hs.710259
Alternative Splicing GalleryENSG00000117242
Gene ExpressionPINK1-AS [ NCBI-GEO ]   PINK1-AS [ EBI - ARRAY_EXPRESS ]   PINK1-AS [ SEEK ]   PINK1-AS [ MEM ]
Gene Expression Viewer (FireBrowse)PINK1-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861548
GTEX Portal (Tissue expression)PINK1-AS
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PINK1-AS
DMDM Disease mutations100861548
Blocks (Seattle)PINK1-AS
Human Protein AtlasENSG00000117242
Protein Interaction databases
FunCoupENSG00000117242
BioGRIDPINK1-AS
STRING (EMBL)PINK1-AS
ZODIACPINK1-AS
Ontologies - Pathways
Huge Navigator PINK1-AS [HugePedia]
snp3D : Map Gene to Disease100861548
BioCentury BCIQPINK1-AS
ClinGenPINK1-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861548
Clinical trialPINK1-AS
Miscellaneous
canSAR (ICR)PINK1-AS (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePINK1-AS
EVEXPINK1-AS
GoPubMedPINK1-AS
iHOPPINK1-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:38:40 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.