Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PIP5K1B (phosphatidylinositol-4-phosphate 5-kinase type 1 beta)

Identity

Alias (NCBI)MSS4
STM7
HGNC (Hugo) PIP5K1B
HGNC Alias symbSTM7
MSS4
HGNC Previous namephosphatidylinositol-4-phosphate 5-kinase, type I, beta
LocusID (NCBI) 8395
Atlas_Id 47416
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 68705240 and ends at 69009176 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CNKSR2 (Xp22.12)::PIP5K1B (9q21.11)PIP5K1B (9q21.11)::ABHD15 (17q11.2)PIP5K1B (9q21.11)::PGM5 (9q21.11)
STK24 (13q32.2)::PIP5K1B (9q21.11)ZNF37A (10p11.1)::PIP5K1B (9q21.11)PIP5K1B 9q21.11::PGM5 9q21.11
STK24 13q32.2::PIP5K1B 9q21.11ZNF37A 10p11.1::PIP5K1B 9q21.11

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PIP5K1B   8995
Cards
Entrez_Gene (NCBI)PIP5K1B    phosphatidylinositol-4-phosphate 5-kinase type 1 beta
AliasesMSS4; STM7
GeneCards (Weizmann)PIP5K1B
Ensembl hg19 (Hinxton)ENSG00000107242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000107242 [Gene_View]  ENSG00000107242 [Sequence]  chr9:68705240-69009176 [Contig_View]  PIP5K1B [Vega]
ICGC DataPortalENSG00000107242
TCGA cBioPortalPIP5K1B
AceView (NCBI)PIP5K1B
Genatlas (Paris)PIP5K1B
SOURCE (Princeton)PIP5K1B
Genetics Home Reference (NIH)PIP5K1B
Genomic and cartography
GoldenPath hg38 (UCSC)PIP5K1B  -     chr9:68705240-69009176 +  9q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIP5K1B  -     9q21.11   [Description]    (hg19-Feb_2009)
GoldenPathPIP5K1B - 9q21.11 [CytoView hg19]  PIP5K1B - 9q21.11 [CytoView hg38]
ImmunoBaseENSG00000107242
Genome Data Viewer NCBIPIP5K1B [Mapview hg19]  
OMIM602745   
Gene and transcription
Genbank (Entrez)AK292734 AK295587 BC030587 CB988216 CK299479
RefSeq transcript (Entrez)NM_001031687 NM_001278253 NM_001376036 NM_001376037 NM_001376039 NM_001376040 NM_001376041 NM_003558
Consensus coding sequences : CCDS (NCBI)PIP5K1B
Gene ExpressionPIP5K1B [ NCBI-GEO ]   PIP5K1B [ EBI - ARRAY_EXPRESS ]   PIP5K1B [ SEEK ]   PIP5K1B [ MEM ]
Gene Expression Viewer (FireBrowse)PIP5K1B [ Firebrowse - Broad ]
GenevisibleExpression of PIP5K1B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8395
GTEX Portal (Tissue expression)PIP5K1B
Human Protein AtlasENSG00000107242-PIP5K1B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PIP5K1B
Human Protein Atlas [tissue]ENSG00000107242-PIP5K1B [tissue]
HPRD04121
Protein Interaction databases
BioGRIDPIP5K1B
STRING (EMBL)PIP5K1B
ZODIACPIP5K1B
Ontologies - Pathways
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPIP5K1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:52:21 CET 2022

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